RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 POLR2IP36954 125 aaKnown RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 HTR2BP41595 481 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CBX5P45973 191 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 ZNF90Q03938 601 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 BTN1A1Q13410 526 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 ELOBQ15370 118 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 RHOHQ15669 191 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 GUK1Q16774 197 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 LINC00483Q53H64 154 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 C1orf137Q5JT78 98 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 KRTAP26-1Q6PEX3 210 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CNIH2Q6PI25 160 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 LINC00173Q6ZV60 143 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 H2BFWTQ7Z2G1 175 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CAMK2N1Q7Z7J9 78 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 SLC25A29Q8N8R3 303 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 OR4C5Q8NGB2 326 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 OR4D5Q8NGN0 318 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 OR10R2Q8NGX6 335 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 RNASEH2CQ8TDP1 164 aaKnown RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 DEDD2Q8WXF8 326 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 SEC22AQ96IW7 307 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 GPR82Q96P67 336 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 ODF3Q96PU9 254 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 PRADC1Q9BSG0 188 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 CHCHD7Q9BUK0 85 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 SH3BGRL3Q9H299 93 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 TMBIM4Q9HC24 238 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 ENY2Q9NPA8 101 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 ANXA10Q9UJ72 324 aa1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 AK6Q9Y3D8 172 aaKnown RBP1.16□□□□□ -2.22
DEPDC4-204ENST00000547823 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV1D-37A0A075B6S9 117 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 A0A087WWC5 75 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 A0A087WX48 190 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 ERICH4A6NGS2 130 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 SNTNA6NMZ2 147 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 SNRPGP15A8MWD9 76 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV1-39P01597 117 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV1D-39P04432 117 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00694P0DN24 101 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 GADD45AP24522 165 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 MAPK3P27361 379 aaPredicted RBP1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 BTCP35070 178 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 ETV1P50549 477 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 FXYD4P59646 89 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 REG3AQ06141 175 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 RAB31Q13636 194 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 KIAA0087Q14695 138 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 MIAQ16674 131 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 IGFL1Q6UW32 110 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 TMPRSS11AQ6ZMR5 421 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 CYB561D1Q8N8Q1 229 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 LRRC20Q8TCA0 184 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 CANT1Q8WVQ1 401 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 MRGPRFQ96AM1 343 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 FAM3DQ96BQ1 224 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 CENPNQ96H22 339 aaPredicted RBP1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00477Q96M19 166 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 CIB1Q99828 191 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 GABARAPL3Q9BY60 117 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 SAMD10Q9BYL1 202 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 NAA50Q9GZZ1 169 aaKnown RBP1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 GABARAPL1Q9H0R8 117 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 RPP21Q9H633 154 aaKnown RBP1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 C8orf4Q9NR00 106 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00474Q9P2X8 69 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 RAB22AQ9UL26 194 aa1.15□□□□□ -2.23
DEPDC4-204ENST00000547823 IGHV3-73A0A0B4J1V6 119 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 ANKRD65E5RJM6 399 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 G3V2T6 193 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 H3BRN7 92 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 FKBP6O75344 327 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 CFDP00746 253 aaPredicted RBP1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV1-5P01602 117 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 FABP1P07148 127 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 OR4E1P0C645 316 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 RPL7P18124 248 aaKnown RBP1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 RNASE4P34096 147 aaKnown RBP1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 CXCL5P42830 114 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 RPS25P62851 125 aaKnown RBP1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 CDNFQ49AH0 187 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 C5orf47Q569G3 176 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 KCNIP4Q6PIL6 250 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 PCP2Q8IVA1 136 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 DEFB107AQ8IZN7 70 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 LGI3Q8N145 548 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 BORCS5Q969J3 196 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 FAM19A4Q96LR4 140 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 SLC50A1Q9BRV3 221 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 PDCD10Q9BUL8 212 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 WFDC1Q9HC57 220 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 SSR3Q9UNL2 185 aa1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 RRP15Q9Y3B9 282 aaKnown RBP1.14□□□□□ -2.23
DEPDC4-204ENST00000547823 A0A1W2PNN7 141 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 METTL21EPA6NDL7 271 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 MEIS3P1A6NDR6 274 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 FAM24AA6NFZ4 105 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms