RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 ZNF506Q5JVG8 444 aa15.39■□□□□ 0.05
SMARCD1-204ENST00000547637 TMEM167BQ9NRX6 74 aa15.39■□□□□ 0.05
SMARCD1-204ENST00000547637 COX11Q9Y6N1 276 aa15.39■□□□□ 0.05
SMARCD1-204ENST00000547637 PGPEP1LA6NFU8 196 aa15.38■□□□□ 0.05
SMARCD1-204ENST00000547637 A8MWV9 139 aa15.38■□□□□ 0.05
SMARCD1-204ENST00000547637 FLI1Q01543 452 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-204ENST00000547637 DPPA3Q6W0C5 159 aa15.38■□□□□ 0.05
SMARCD1-204ENST00000547637 PRNTQ86SH4 94 aa15.38■□□□□ 0.05
SMARCD1-204ENST00000547637 HERC1Q15751 4861 aa15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 ZNF80P51504 273 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 FGF8P55075 233 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 SUMO1P63165 101 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 ZFP2Q6ZN57 461 aa15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 RAB24Q969Q5 203 aa15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 EPDR1Q9UM22 224 aa15.37■□□□□ 0.05
SMARCD1-204ENST00000547637 A0A087WWC5 75 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 GGTLC3B5MD39 225 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 SEC11BP0C7V7 166 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 GCHFRP30047 84 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 IFITM3Q01628 133 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 PIK3CD-AS1Q5SR53 167 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 TMEM75Q8N9X5 138 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 OR2G3Q8NGZ4 309 aa15.36■□□□□ 0.05
SMARCD1-204ENST00000547637 CXorf1O96002 111 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 SERF2P84101 59 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 LGALSLQ3ZCW2 172 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 HSD17B11Q8NBQ5 300 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 RMI2Q96E14 147 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 PSMG3Q9BT73 122 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 C11orf21Q9P2W6 132 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 URGCP-MRPS24S4R325 110 aa15.35■□□□□ 0.05
SMARCD1-204ENST00000547637 SUN5Q8TC36 379 aa15.34■□□□□ 0.05
SMARCD1-204ENST00000547637 ACTR3CQ9C0K3 210 aaPredicted RBP15.34■□□□□ 0.05
SMARCD1-204ENST00000547637 GAGE12JA6NER3 117 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 FABP5P3A8MUU1 101 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 RNASE3P12724 160 aaKnown RBP15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 GAGE1Q13065 139 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 GAGE4Q13068 117 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 GAGE5Q13069 117 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 GAGE13Q4V321 117 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 PARLQ9H300 379 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 FAM30AQ9NZY2 134 aa15.33■□□□□ 0.04
SMARCD1-204ENST00000547637 ASIPP42127 132 aa15.32■□□□□ 0.04
SMARCD1-204ENST00000547637 IGLV2-11P01706 119 aa15.31■□□□□ 0.04
SMARCD1-204ENST00000547637 OR2T35Q8NGX2 323 aa15.31■□□□□ 0.04
SMARCD1-204ENST00000547637 A0A1W2PRE2 83 aa15.3■□□□□ 0.04
SMARCD1-204ENST00000547637 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
SMARCD1-204ENST00000547637 SYT8Q8NBV8 401 aa15.3■□□□□ 0.04
SMARCD1-204ENST00000547637 TNFSF18Q9UNG2 199 aa15.3■□□□□ 0.04
SMARCD1-204ENST00000547637 SRRM2Q9UQ35 2752 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 RHODO00212 210 aa15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 IFNA7P01567 189 aa15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 KCNIP4Q6PIL6 250 aa15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 Q8N976 141 aa15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 DEFB104AQ8WTQ1 72 aa15.29■□□□□ 0.04
SMARCD1-204ENST00000547637 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-204ENST00000547637 DAZ4Q86SG3 579 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-204ENST00000547637 DAZ3Q9NR90 486 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-204ENST00000547637 IL36BQ9NZH7 164 aa15.28■□□□□ 0.04
SMARCD1-204ENST00000547637 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.04
SMARCD1-204ENST00000547637 LECT2O14960 151 aa15.27■□□□□ 0.04
SMARCD1-204ENST00000547637 Q6ZSA8 131 aa15.27■□□□□ 0.04
SMARCD1-204ENST00000547637 LINC00528Q8N1L1 170 aa15.27■□□□□ 0.04
SMARCD1-204ENST00000547637 NKX6-2Q9C056 277 aaPredicted RBP15.27■□□□□ 0.04
SMARCD1-204ENST00000547637 IGKV3D-20A0A0C4DH25 116 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 B4DEV8 164 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 ELOBQ15370 118 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 LINC00479Q96M42 142 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 AQP10Q96PS8 301 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 ARL2-SNX15V9GYD0 113 aa15.26■□□□□ 0.03
SMARCD1-204ENST00000547637 LINC00694P0DN24 101 aa15.25■□□□□ 0.03
SMARCD1-204ENST00000547637 WFDC2Q14508 124 aa15.25■□□□□ 0.03
SMARCD1-204ENST00000547637 BAALCQ8WXS3 180 aa15.25■□□□□ 0.03
SMARCD1-204ENST00000547637 TRAV34A0A0B4J273 112 aa15.24■□□□□ 0.03
SMARCD1-204ENST00000547637 INO80EQ8NBZ0 244 aaPredicted RBP15.24■□□□□ 0.03
SMARCD1-204ENST00000547637 OR11H4Q8NGC9 324 aa15.24■□□□□ 0.03
SMARCD1-204ENST00000547637 IGKV2D-24A0A075B6R9 120 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 A0A087WX48 190 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 BORCS7-ASMTA0A0B4J1R7 106 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 Q8N3U1 123 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 HIST1H2BAQ96A08 127 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 CHCHD7Q9BUK0 85 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 SAMD10Q9BYL1 202 aa15.23■□□□□ 0.03
SMARCD1-204ENST00000547637 KRTAP29-1A8MX34 341 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 H3BVH4 76 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 FAM74A4Q5TZK3 123 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 DMRTA1Q5VZB9 504 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 C14orf178Q8N769 122 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 ZFP30Q9Y2G7 519 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 PHLDA3Q9Y5J5 127 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 ALG5Q9Y673 324 aa15.22■□□□□ 0.03
SMARCD1-204ENST00000547637 MYCBP2O75592 4640 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 PEX7O00628 323 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 DNLZQ5SXM8 178 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 UFSP1Q6NVU6 142 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 NIT1Q86X76 327 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 MED28Q9H204 178 aa15.21■□□□□ 0.03
SMARCD1-204ENST00000547637 JPT2Q9H910 190 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms