RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 B4DEV8 164 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 K7EQD1 137 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 RS1O15537 224 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 SH2D1AO60880 128 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 SRIP30626 198 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 SULT1A2P50226 295 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 ZNF506Q5JVG8 444 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
DDX54-204ENST00000546898 A0A1B0GVY2 172 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 SCO2A0A1W2PP80 73 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 GYPEP15421 78 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
DDX54-204ENST00000546898 CRIP1P50238 77 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 ZNF674Q2M3X9 581 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 DNLZQ5SXM8 178 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 CFAP126Q5VTH2 177 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 IL36BQ9NZH7 164 aa10.94□□□□□ -0.66
DDX54-204ENST00000546898 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
DDX54-204ENST00000546898 KRBOX1C9JBD0 128 aa10.93□□□□□ -0.66
DDX54-204ENST00000546898 BTF3P20290 206 aaKnown RBP10.93□□□□□ -0.66
DDX54-204ENST00000546898 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
DDX54-204ENST00000546898 hCG_2014768A0A024R1R8 64 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 SIVA1O15304 175 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 NXPH4O95158 308 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 SH2D6Q7Z4S9 175 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 GNG13Q9P2W3 67 aa10.92□□□□□ -0.66
DDX54-204ENST00000546898 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 A8MWV9 139 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 H3BVH4 76 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 M0R036 132 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 RHOHQ15669 191 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 C9orf62Q8N4C0 152 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 KRTAP1-5Q9BYS1 174 aa10.91□□□□□ -0.66
DDX54-204ENST00000546898 IFNA1P01562 189 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
DDX54-204ENST00000546898 CCL20P78556 96 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 NHLRC2Q8NBF2 726 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 PRADC1Q9BSG0 188 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 MLST8Q9BVC4 326 aa10.9□□□□□ -0.66
DDX54-204ENST00000546898 ARMS2P0C7Q2 107 aa10.89□□□□□ -0.67
DDX54-204ENST00000546898 BAGE2Q86Y30 109 aa10.89□□□□□ -0.67
DDX54-204ENST00000546898 SLC25A29Q8N8R3 303 aa10.89□□□□□ -0.67
DDX54-204ENST00000546898 PARLQ9H300 379 aa10.89□□□□□ -0.67
DDX54-204ENST00000546898 PKD1P98161 4303 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 LOC100131303A0A0U1RQF7 123 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 CXCL1P09341 107 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
DDX54-204ENST00000546898 TIRAPP58753 221 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 SCRT2Q9NQ03 307 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
DDX54-204ENST00000546898 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
DDX54-204ENST00000546898 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
DDX54-204ENST00000546898 RHODO00212 210 aa10.87□□□□□ -0.67
DDX54-204ENST00000546898 MED14OSP0DP75 135 aa10.87□□□□□ -0.67
DDX54-204ENST00000546898 MEF2BQ02080 365 aaPredicted RBP10.87□□□□□ -0.67
DDX54-204ENST00000546898 HERC2O95714 4834 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 K7EP13 123 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 PDE6DO43924 150 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 BCL2P10415 239 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
DDX54-204ENST00000546898 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 ZNF575Q86XF7 245 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 LY96Q9Y6Y9 160 aa10.86□□□□□ -0.67
DDX54-204ENST00000546898 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 TNP2Q05952 138 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 SMIM12Q96EX1 92 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 DERL1Q9BUN8 251 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
DDX54-204ENST00000546898 TRAV9-2A0A087WT02 112 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 LINC00315P59091 139 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 CENPWQ5EE01 88 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 PRR27Q6MZM9 219 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 WFDC10BQ8IUB3 73 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 JPT2Q9H910 190 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 DNAH11Q96DT5 4516 aa10.84□□□□□ -0.67
DDX54-204ENST00000546898 M0R381 172 aa10.83□□□□□ -0.68
DDX54-204ENST00000546898 DNAH10OSP0CZ25 163 aa10.83□□□□□ -0.68
DDX54-204ENST00000546898 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
DDX54-204ENST00000546898 VAX2Q9UIW0 290 aa10.83□□□□□ -0.68
DDX54-204ENST00000546898 SNAI2O43623 268 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 EVI2AP22794 236 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 GNG4P50150 75 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 BLOC1S1P78537 153 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 SAMD10Q9BYL1 202 aa10.82□□□□□ -0.68
DDX54-204ENST00000546898 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 IGLV2-8P01709 118 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 ALKAL2Q6UX46 152 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms