RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PHLDA3Q9Y5J5 127 aa8.88□□□□□ -0.99
CCDC38-202ENST00000546386 A0A0J9YX75 114 aa8.88□□□□□ -0.99
CCDC38-202ENST00000546386 ATP6V0BQ99437 205 aa8.88□□□□□ -0.99
CCDC38-202ENST00000546386 RAB4AP20338 218 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 SIGLEC8Q9NYZ4 499 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 FAM231BA6NCW3 169 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1BA6NDE4 496 aaKnown RBP8.87□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1EA6NEQ0 496 aaKnown RBP8.87□□□□□ -0.99
CCDC38-202ENST00000546386 TCAPO15273 167 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1DP0C7P1 496 aaKnown RBP8.87□□□□□ -0.99
CCDC38-202ENST00000546386 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
CCDC38-202ENST00000546386 TRAV21A0A0B4J279 112 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
CCDC38-202ENST00000546386 HILS1P60008 231 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 DEFB114Q30KQ6 69 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 RASL11AQ6T310 242 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 Q8N1Y9 231 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 RNF152Q8N8N0 203 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 RPL39LQ96EH5 51 aaKnown RBP8.86□□□□□ -0.99
CCDC38-202ENST00000546386 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
CCDC38-202ENST00000546386 CTRLP40313 264 aa8.86□□□□□ -0.99
CCDC38-202ENST00000546386 ORMDL3Q8N138 153 aa8.85□□□□□ -0.99
CCDC38-202ENST00000546386 COX8CQ7Z4L0 72 aa8.85□□□□□ -0.99
CCDC38-202ENST00000546386 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 OR4C46A6NHA9 309 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 LGALS9O00182 355 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 ASIPP42127 132 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 S100A12P80511 92 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 COX19Q49B96 90 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 FA2HQ7L5A8 372 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 REC114Q7Z4M0 266 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 MRPL53Q96EL3 112 aaKnown RBP8.84□□□□□ -0.99
CCDC38-202ENST00000546386 F5H697 171 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 AP5S1Q9NUS5 200 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 Q9UF83 564 aa8.84□□□□□ -0.99
CCDC38-202ENST00000546386 FBLL1A6NHQ2 334 aaKnown RBP8.83□□□□□ -1
CCDC38-202ENST00000546386 LEPROTL1O95214 131 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 CDKN1BP46527 198 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 PROK1P58294 105 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 Q8N976 141 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 PEMTQ9UBM1 199 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 CBY3A6NI87 242 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 TNFRSF6BO95407 300 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 RPL35AP18077 110 aaKnown RBP8.83□□□□□ -1
CCDC38-202ENST00000546386 Q6AWC8 147 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 C14orf144Q96I85 54 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
CCDC38-202ENST00000546386 C7orf71A4D174 169 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 KLLNB2CW77 178 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 SNAI2O43623 268 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 RPS20P60866 119 aaKnown RBP8.82□□□□□ -1
CCDC38-202ENST00000546386 TMEM86BQ8N661 226 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 TSSC4Q9Y5U2 329 aaPredicted RBP8.82□□□□□ -1
CCDC38-202ENST00000546386 TCF21O43680 179 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 ODF3L2Q3SX64 289 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 TMEM191AQ9H0A3 160 aa8.82□□□□□ -1
CCDC38-202ENST00000546386 A0A096LNJ9 63 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 hDV102S1A0JD36 115 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 ADARB2-AS1A8MUL3 147 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 H3BMM0 161 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 ESDP10768 282 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 ZNF256Q9Y2P7 627 aaPredicted RBP8.81□□□□□ -1
CCDC38-202ENST00000546386 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
CCDC38-202ENST00000546386 P0DMU3 169 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 FAM231AP0DMU4 169 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 FAM231CP0DMU5 169 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 BTF3P20290 206 aaKnown RBP8.81□□□□□ -1
CCDC38-202ENST00000546386 AMTNQ6UX39 209 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 ARL6IP6Q8N6S5 226 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 MGAM2Q2M2H8 2515 aa8.81□□□□□ -1
CCDC38-202ENST00000546386 AZU1P20160 251 aa8.8□□□□□ -1
CCDC38-202ENST00000546386 IGHV3-16A0A0C4DH30 117 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 ZNF876PQ49A33 203 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 ZNF705AQ6ZN79 300 aaPredicted RBP8.79□□□□□ -1
CCDC38-202ENST00000546386 TMEM208Q9BTX3 173 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 PF4P02776 101 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 DDTP30046 118 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 LEPP41159 167 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 BATFQ16520 125 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 GATD1Q8NB37 220 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 LINC01587Q99440 93 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 VAMP8Q9BV40 100 aa8.79□□□□□ -1
CCDC38-202ENST00000546386 TSTD3H0UI37 97 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 OR5AL1P0C617 328 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 RIPPLY3P57055 190 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 SMIM15Q7Z3B0 74 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
CCDC38-202ENST00000546386 OR2K2Q8NGT1 345 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 EMP1P54849 157 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 FOXI2Q6ZQN5 318 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 CNFNQ9BYD5 112 aa8.78□□□□□ -1
CCDC38-202ENST00000546386 FHL3Q13643 280 aa8.77□□□□□ -1
CCDC38-202ENST00000546386 SPATA45Q537H7 98 aa8.77□□□□□ -1
CCDC38-202ENST00000546386 IGHV1OR15-1A0A075B7D0 117 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 IGHV3-53P01767 116 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms