RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RPL19P84098 196 aaKnown RBP11.79□□□□□ -0.52
LTBR-215ENST00000546296 SLAQ13239 276 aa11.79□□□□□ -0.52
LTBR-215ENST00000546296 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
LTBR-215ENST00000546296 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
LTBR-215ENST00000546296 ALMS1Q8TCU4 4167 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 P0DMU3 169 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 FAM231AP0DMU4 169 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 FAM231CP0DMU5 169 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 FHL2Q14192 279 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 PTH2Q96A98 100 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 HHLA3Q9XRX5 114 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 PHLDA3Q9Y5J5 127 aa11.78□□□□□ -0.52
LTBR-215ENST00000546296 PAX4O43316 350 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
LTBR-215ENST00000546296 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
LTBR-215ENST00000546296 PEA15Q15121 130 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 UBE2DNLQ8IWF7 75 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 OCC1Q8TAD7 63 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 PRO0255Q9UI72 69 aa11.77□□□□□ -0.53
LTBR-215ENST00000546296 RS1O15537 224 aa11.76□□□□□ -0.53
LTBR-215ENST00000546296 P01737 135 aa11.76□□□□□ -0.53
LTBR-215ENST00000546296 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
LTBR-215ENST00000546296 OR2D3Q8NGH3 330 aa11.76□□□□□ -0.53
LTBR-215ENST00000546296 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
LTBR-215ENST00000546296 C19orf71A6NCJ1 209 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 H3BNG1 76 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 CXCL1P09341 107 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
LTBR-215ENST00000546296 CFAP126Q5VTH2 177 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
LTBR-215ENST00000546296 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 ZNF727A8MUV8 499 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 A8MWV9 139 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 M0R381 172 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 CIDEAO60543 219 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 CRYBA4P53673 196 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 SCRT2Q9NQ03 307 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
LTBR-215ENST00000546296 K7EN84 100 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 ZFP82Q8N141 532 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 NUDT10Q8NFP7 164 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 NUDT11Q96G61 164 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 TPPP3Q9BW30 176 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 SACSQ9NZJ4 4579 aa11.73□□□□□ -0.53
LTBR-215ENST00000546296 GZMBP10144 247 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 CCL18P55774 89 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 SSTP61278 116 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
LTBR-215ENST00000546296 RNF212Q495C1 297 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
LTBR-215ENST00000546296 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
LTBR-215ENST00000546296 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 C9JQL5 133 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 FAM74A3Q4VXF1 159 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 JPT2Q9H910 190 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
LTBR-215ENST00000546296 RYR2Q92736 4967 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 A0A096LPF7 62 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 GYPEP15421 78 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
LTBR-215ENST00000546296 MRPL23Q16540 153 aaKnown RBP11.7□□□□□ -0.54
LTBR-215ENST00000546296 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 OR10AG1Q8NH19 301 aa11.7□□□□□ -0.54
LTBR-215ENST00000546296 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
LTBR-215ENST00000546296 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
LTBR-215ENST00000546296 MUC4Q99102 2169 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 RYR3Q15413 4870 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 SNAI2O43623 268 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 GATCO43716 136 aaKnown RBP11.69□□□□□ -0.54
LTBR-215ENST00000546296 ERVFC1-1P60608 527 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 IFITM2Q01629 132 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 FAM74A4Q5TZK3 123 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 ZFP2Q6ZN57 461 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 SAMD10Q9BYL1 202 aa11.69□□□□□ -0.54
LTBR-215ENST00000546296 A0A087WWL8 130 aa11.68□□□□□ -0.54
LTBR-215ENST00000546296 RHODO00212 210 aa11.68□□□□□ -0.54
LTBR-215ENST00000546296 CLLU1Q5K131 121 aa11.68□□□□□ -0.54
LTBR-215ENST00000546296 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
LTBR-215ENST00000546296 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
LTBR-215ENST00000546296 VPS13DQ5THJ4 4388 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 K7EQD1 137 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 SRIP30626 198 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 FAM3BP58499 235 aaPredicted RBP11.67□□□□□ -0.54
LTBR-215ENST00000546296 RHOHQ15669 191 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 ESRGQ1W209 222 aa11.67□□□□□ -0.54
LTBR-215ENST00000546296 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms