RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PARLQ9H300 379 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
CD9-211ENST00000546073 A0A0J9YY99 117 aa12.32□□□□□ -0.44
CD9-211ENST00000546073 A8MWV9 139 aa12.32□□□□□ -0.44
CD9-211ENST00000546073 H3BVH4 76 aa12.32□□□□□ -0.44
CD9-211ENST00000546073 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
CD9-211ENST00000546073 C9orf85Q96MD7 179 aa12.32□□□□□ -0.44
CD9-211ENST00000546073 CXCL1P09341 107 aa12.31□□□□□ -0.44
CD9-211ENST00000546073 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
CD9-211ENST00000546073 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
CD9-211ENST00000546073 OR2D3Q8NGH3 330 aa12.31□□□□□ -0.44
CD9-211ENST00000546073 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
CD9-211ENST00000546073 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
CD9-211ENST00000546073 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
CD9-211ENST00000546073 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
CD9-211ENST00000546073 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
CD9-211ENST00000546073 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
CD9-211ENST00000546073 ICOSQ9Y6W8 199 aa12.3□□□□□ -0.44
CD9-211ENST00000546073 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
CD9-211ENST00000546073 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 M0R381 172 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 RHODO00212 210 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 HOXA5P20719 270 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 FAM3BP58499 235 aaPredicted RBP12.28□□□□□ -0.44
CD9-211ENST00000546073 MRPL23Q16540 153 aaKnown RBP12.28□□□□□ -0.44
CD9-211ENST00000546073 RNF212Q495C1 297 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
CD9-211ENST00000546073 RS1O15537 224 aa12.27□□□□□ -0.45
CD9-211ENST00000546073 SMIM17P0DL12 118 aa12.27□□□□□ -0.45
CD9-211ENST00000546073 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
CD9-211ENST00000546073 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
CD9-211ENST00000546073 OCC1Q8TAD7 63 aa12.27□□□□□ -0.45
CD9-211ENST00000546073 A0A1W2PPQ1 181 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 F2Z2F3 143 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
CD9-211ENST00000546073 SRIP30626 198 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 CRYBA4P53673 196 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 ERVFC1-1P60608 527 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 RPL19P84098 196 aaKnown RBP12.26□□□□□ -0.45
CD9-211ENST00000546073 FHL2Q14192 279 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
CD9-211ENST00000546073 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
CD9-211ENST00000546073 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
CD9-211ENST00000546073 CFAP126Q5VTH2 177 aa12.25□□□□□ -0.45
CD9-211ENST00000546073 ZFP2Q6ZN57 461 aa12.25□□□□□ -0.45
CD9-211ENST00000546073 C15orf54Q8N8G6 183 aa12.25□□□□□ -0.45
CD9-211ENST00000546073 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 CACNG7P62955 275 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 RHOHQ15669 191 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 SOHLH1Q5JUK2 328 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 NUDT10Q8NFP7 164 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 NUDT11Q96G61 164 aa12.24□□□□□ -0.45
CD9-211ENST00000546073 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
CD9-211ENST00000546073 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
CD9-211ENST00000546073 TRBV6-4A0A1B0GX49 114 aa12.23□□□□□ -0.45
CD9-211ENST00000546073 C19orf71A6NCJ1 209 aa12.23□□□□□ -0.45
CD9-211ENST00000546073 GYPEP15421 78 aa12.23□□□□□ -0.45
CD9-211ENST00000546073 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
CD9-211ENST00000546073 A8MWL6 223 aa12.22□□□□□ -0.45
CD9-211ENST00000546073 SSTP61278 116 aa12.22□□□□□ -0.45
CD9-211ENST00000546073 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
CD9-211ENST00000546073 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.22□□□□□ -0.45
CD9-211ENST00000546073 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
CD9-211ENST00000546073 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
CD9-211ENST00000546073 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 SNAI2O43623 268 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 GATA1P15976 413 aaPredicted RBP12.21□□□□□ -0.45
CD9-211ENST00000546073 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 FAM231DQ6ZW35 169 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 VSIG2Q96IQ7 327 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 AP1S3Q96PC3 154 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 RNASE7Q9H1E1 156 aaKnown RBP12.21□□□□□ -0.45
CD9-211ENST00000546073 NAT8Q9UHE5 227 aa12.21□□□□□ -0.45
CD9-211ENST00000546073 TRGC1P0CF51 173 aa12.2□□□□□ -0.46
CD9-211ENST00000546073 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
CD9-211ENST00000546073 A0A096LPF7 62 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 F5H697 171 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 ADIRFQ15847 76 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 LINC01551Q86U37 167 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
CD9-211ENST00000546073 A0A087WWL8 130 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 K7EN84 100 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 K7EQD1 137 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 GZMBP10144 247 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 ZNF56Q15929 161 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 SLC25A29Q8N8R3 303 aa12.18□□□□□ -0.46
CD9-211ENST00000546073 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
CD9-211ENST00000546073 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
CD9-211ENST00000546073 CT83Q5H943 113 aa12.17□□□□□ -0.46
CD9-211ENST00000546073 WDR73Q6P4I2 378 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms