RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 OSTCQ9NRP0 149 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-221ENST00000544983 GAGE12BA1L429 117 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 A8MWL6 223 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 F2Z2F3 143 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 GAGE7O76087 117 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 ARMS2P0C7Q2 107 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 GAGE12FP0CL80 117 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 GAGE12GP0CL81 117 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 GAGE12IP0CL82 117 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 TCTAP57738 103 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 SLAQ13239 276 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-221ENST00000544983 COMMD7Q86VX2 200 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 C15orf54Q8N8G6 183 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-221ENST00000544983 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.07
SNHG1-221ENST00000544983 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
SNHG1-221ENST00000544983 TMSB15BA0A087X1C1 80 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 DEFB131BA0A096LNP1 70 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 GRIFINA4D1Z8 144 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 H3BVH4 76 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 SNAI2O43623 268 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 GATCO43716 136 aaKnown RBP8.33□□□□□ -1.08
SNHG1-221ENST00000544983 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
SNHG1-221ENST00000544983 ZFP82Q8N141 532 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 ISOC2Q96AB3 205 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 MUC4Q99102 2169 aa8.33□□□□□ -1.08
SNHG1-221ENST00000544983 RNASE7Q9H1E1 156 aaKnown RBP8.33□□□□□ -1.08
SNHG1-221ENST00000544983 TRAV4A0A0B4J268 109 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 A8MWV9 139 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
SNHG1-221ENST00000544983 ADIRFQ15847 76 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 SFRP2Q96HF1 295 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
SNHG1-221ENST00000544983 MRPL16Q9NX20 251 aaKnown RBP8.32□□□□□ -1.08
SNHG1-221ENST00000544983 PPP1R2P9O14990 202 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 NXPH4O95158 308 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-221ENST00000544983 CACNG7P62955 275 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
SNHG1-221ENST00000544983 F5H768 121 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 F8W036 122 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 H3BNG1 76 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 OR10G8Q8NGN5 311 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 DNAH7Q8WXX0 4024 aa8.3□□□□□ -1.08
SNHG1-221ENST00000544983 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 RHODO00212 210 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 RS1O15537 224 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 HTN3P15516 51 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 CTRLP40313 264 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
SNHG1-221ENST00000544983 M0R381 172 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 MT-ND4LP03901 98 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 GZMBP10144 247 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 C10orf91Q5T1B1 145 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 CFAP126Q5VTH2 177 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 ZFAND6Q6FIF0 208 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 PRO0255Q9UI72 69 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 V9GYV3 84 aa8.28□□□□□ -1.08
SNHG1-221ENST00000544983 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 IGLL5B9A064 214 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 LYZL1Q6UWQ5 148 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 POM121L12Q8N7R1 296 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 OR10AG1Q8NH19 301 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 AP1S3Q96PC3 154 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 HHLA3Q9XRX5 114 aa8.27□□□□□ -1.09
SNHG1-221ENST00000544983 EPPK1P58107 5090 aaKnown RBP8.26□□□□□ -1.09
SNHG1-221ENST00000544983 TRGC1P0CF51 173 aa8.26□□□□□ -1.09
SNHG1-221ENST00000544983 FHL2Q14192 279 aa8.26□□□□□ -1.09
SNHG1-221ENST00000544983 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
SNHG1-221ENST00000544983 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
SNHG1-221ENST00000544983 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
SNHG1-221ENST00000544983 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
SNHG1-221ENST00000544983 A0A1B0GUT8 65 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 PAX4O43316 350 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms