RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RNASE3P12724 160 aaKnown RBP10.12□□□□□ -0.79
HCFC2-202ENST00000544223 IFI27P40305 119 aaPredicted RBP10.12□□□□□ -0.79
HCFC2-202ENST00000544223 LINC00469Q8N7U9 141 aa10.12□□□□□ -0.79
HCFC2-202ENST00000544223 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
HCFC2-202ENST00000544223 ZNF256Q9Y2P7 627 aaPredicted RBP10.12□□□□□ -0.79
HCFC2-202ENST00000544223 ZNF324O75467 553 aaPredicted RBP10.11□□□□□ -0.79
HCFC2-202ENST00000544223 NPYP01303 97 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 ZNF493Q6ZR52 646 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 LENEPQ9Y5L5 61 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 HSBP1O75506 76 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 RAB4AP20338 218 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 CKS2P33552 79 aa10.11□□□□□ -0.79
HCFC2-202ENST00000544223 ODF3L2Q3SX64 289 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 C14orf178Q8N769 122 aaPredicted RBP10.1□□□□□ -0.79
HCFC2-202ENST00000544223 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 C7orf71A4D174 169 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 CDKN1BP46527 198 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 FAM159AQ6UWV7 190 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
HCFC2-202ENST00000544223 H0Y8G0 127 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 H3BMM0 161 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 ESDP10768 282 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 ASIPP42127 132 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 JOSD1Q15040 202 aaPredicted RBP10.09□□□□□ -0.79
HCFC2-202ENST00000544223 Q8N1Y9 231 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.09□□□□□ -0.79
HCFC2-202ENST00000544223 PHLDA3Q9Y5J5 127 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 CRLF1O75462 422 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 FOXI2Q6ZQN5 318 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 CNFNQ9BYD5 112 aa10.09□□□□□ -0.79
HCFC2-202ENST00000544223 IGHV1-24A0A0C4DH33 117 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 CRXO43186 299 aaPredicted RBP10.08□□□□□ -0.8
HCFC2-202ENST00000544223 NDUFA7O95182 113 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 LINC00614P0C842 121 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 SPATA12Q7Z6I5 190 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 NACAE9PAV3 2078 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
HCFC2-202ENST00000544223 A0A087WWL8 130 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 GATD1Q8NB37 220 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 JMJD8Q96S16 334 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 A0A1B0GW15 77 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 SNAI2O43623 268 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
HCFC2-202ENST00000544223 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
HCFC2-202ENST00000544223 MGPP08493 103 aa10.06□□□□□ -0.8
HCFC2-202ENST00000544223 LEPP41159 167 aa10.06□□□□□ -0.8
HCFC2-202ENST00000544223 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 SAMD13Q5VXD3 122 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 PF4P02776 101 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
HCFC2-202ENST00000544223 U3KQK5 164 aa10.05□□□□□ -0.8
HCFC2-202ENST00000544223 OR4C46A6NHA9 309 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 Q8N976 141 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 SPAG8Q99932 426 aaPredicted RBP10.04□□□□□ -0.8
HCFC2-202ENST00000544223 IGHV3-16A0A0C4DH30 117 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 CBY3A6NI87 242 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 ZNF664Q8N3J9 261 aa10.04□□□□□ -0.8
HCFC2-202ENST00000544223 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 IGHV1OR15-1A0A075B7D0 117 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 IGHV3-73A0A0B4J1V6 119 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 DUSP14O95147 198 aaKnown RBP10.03□□□□□ -0.8
HCFC2-202ENST00000544223 NEGR1Q7Z3B1 354 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 SCRT2Q9NQ03 307 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 A0A096LNJ9 63 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 RPL35AP18077 110 aaKnown RBP10.03□□□□□ -0.8
HCFC2-202ENST00000544223 FA2HQ7L5A8 372 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
HCFC2-202ENST00000544223 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
HCFC2-202ENST00000544223 OR11H12B2RN74 326 aa10.02□□□□□ -0.81
HCFC2-202ENST00000544223 TCAPO15273 167 aa10.02□□□□□ -0.81
HCFC2-202ENST00000544223 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.81
HCFC2-202ENST00000544223 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 AZU1P20160 251 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 TSPOP30536 169 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 DNLZQ5SXM8 178 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 STHQ8IWL8 128 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 IGHV4-4A0A075B6R2 117 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 FOSL1P15407 271 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 NRACQ8N912 160 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 C18orf15Q96N68 181 aa10.01□□□□□ -0.81
HCFC2-202ENST00000544223 SMIM15Q7Z3B0 74 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 OR2K2Q8NGT1 345 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 LINC01587Q99440 93 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 CACNG7P62955 275 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 DEFA6Q01524 100 aa10□□□□□ -0.81
HCFC2-202ENST00000544223 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms