RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 ALMS1Q8TCU4 4167 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 CXCL1P09341 107 aa10.57□□□□□ -0.72
CD9-210ENST00000543916 PTH2Q96A98 100 aa10.57□□□□□ -0.72
CD9-210ENST00000543916 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
CD9-210ENST00000543916 SMIM7Q9BQ49 75 aa10.57□□□□□ -0.72
CD9-210ENST00000543916 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
CD9-210ENST00000543916 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 TRAV4A0A0B4J268 109 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 RAB14P61106 215 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 FHL2Q14192 279 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 DAZAP1Q96EP5 407 aaKnown RBP10.56□□□□□ -0.72
CD9-210ENST00000543916 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
CD9-210ENST00000543916 A0A0J9YY99 117 aa10.55□□□□□ -0.72
CD9-210ENST00000543916 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
CD9-210ENST00000543916 PEA15Q15121 130 aa10.55□□□□□ -0.72
CD9-210ENST00000543916 CLLU1Q5K131 121 aa10.55□□□□□ -0.72
CD9-210ENST00000543916 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
CD9-210ENST00000543916 RS1O15537 224 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 LY6G6CO95867 125 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 P01737 135 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 GZMBP10144 247 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 VSIG2Q96IQ7 327 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
CD9-210ENST00000543916 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
CD9-210ENST00000543916 TRGV4A0A0C4DH28 118 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 NUDT3O95989 172 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 JPT2Q9H910 190 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 PHLDA3Q9Y5J5 127 aa10.53□□□□□ -0.72
CD9-210ENST00000543916 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 M0R381 172 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 SNAI2O43623 268 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 CRYBA4P53673 196 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 RPS20P60866 119 aaKnown RBP10.52□□□□□ -0.73
CD9-210ENST00000543916 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 SSBP4Q9BWG4 385 aaPredicted RBP10.52□□□□□ -0.73
CD9-210ENST00000543916 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 DNAH1Q9P2D7 4330 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 RYR2Q92736 4967 aa10.52□□□□□ -0.73
CD9-210ENST00000543916 RYR3Q15413 4870 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 IGHV3-73A0A0B4J1V6 119 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 H3BNG1 76 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 PAX4O43316 350 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 NXPH4O95158 308 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
CD9-210ENST00000543916 RPP21Q9H633 154 aaKnown RBP10.51□□□□□ -0.73
CD9-210ENST00000543916 A8MWV9 139 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
CD9-210ENST00000543916 SLAQ13239 276 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 FAM74A3Q4VXF1 159 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 FAM231DQ6ZW35 169 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 HYDINQ4G0P3 5121 aa10.5□□□□□ -0.73
CD9-210ENST00000543916 A0A096LPF7 62 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 P0DMU3 169 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 TMEM241Q24JQ0 296 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 UFSP1Q6NVU6 142 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 FER1L6-AS1Q8NA97 138 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 TPPP3Q9BW30 176 aa10.49□□□□□ -0.73
CD9-210ENST00000543916 XKRY2A2RUG3 117 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
CD9-210ENST00000543916 CIDEAO60543 219 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 RPL23P62829 140 aaKnown RBP10.48□□□□□ -0.73
CD9-210ENST00000543916 SOHLH1Q5JUK2 328 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
CD9-210ENST00000543916 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 A0A087WWL8 130 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 SSTP61278 116 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 LYZL1Q6UWQ5 148 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 ZFP2Q6ZN57 461 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 Q6ZSN1 163 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 SLC25A29Q8N8R3 303 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 ISOC2Q96AB3 205 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
CD9-210ENST00000543916 CRYGDP07320 174 aa10.46□□□□□ -0.73
CD9-210ENST00000543916 GYPEP15421 78 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms