RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TMEM208Q9BTX3 173 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 UBQLN2Q9UHD9 624 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 EPDR1Q9UM22 224 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
MDM2-228ENST00000542502 TRBV6-1A0A0K0K1D8 114 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
MDM2-228ENST00000542502 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
MDM2-228ENST00000542502 FAM74A7A6NL05 159 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 H7BYZ3 331 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 TCRAP04437 139 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 GPX1P07203 203 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
MDM2-228ENST00000542502 CRISP2P16562 243 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 UBE2G1P62253 170 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 MEF2BQ02080 365 aaPredicted RBP3.17□□□□□ -1.9
MDM2-228ENST00000542502 TEX261Q6UWH6 196 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 CD164L2Q6UWJ8 174 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 ZNF493Q6ZR52 646 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 ZNF767PQ75MW2 155 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 EXOC3-AS1Q8N2X6 119 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 FAM24BQ8N5W8 94 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 RNF182Q8N6D2 247 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 TMEM75Q8N9X5 138 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 KCNS1Q96KK3 526 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 RARRES2Q99969 163 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 VAX2Q9UIW0 290 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 U3KQK5 164 aa3.17□□□□□ -1.9
MDM2-228ENST00000542502 TRAV21A0A0B4J279 112 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 KNCNA6PVL3 124 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 ZNF705FA8MVS1 300 aaPredicted RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 C11orf94C9JXX5 98 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 TMEM250H0YL14 139 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 SLC17A3O00476 420 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 PEX7O00628 323 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 PRB2P02812 416 aaPredicted RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 CT45A10P0DMU9 189 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 FGF8P55075 233 aaPredicted RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 TAS2R60P59551 318 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 ZNF726P1Q15940 193 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 RRN3P1Q2M238 152 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 SMUG1Q53HV7 270 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 ALKAL2Q6UX46 152 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 ZNF705AQ6ZN79 300 aaPredicted RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 GOLT1AQ6ZVE7 132 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 Q6ZVQ6 151 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 SBSPONQ8IVN8 264 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 ZNF680Q8NEM1 530 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 LYPD6BQ8NI32 183 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 OVOL2Q9BRP0 275 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 LINC00467Q9BRT7 94 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 AGPAT4-IT1Q9H0P7 198 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 C11orf68Q9H3H3 251 aaKnown RBP3.16□□□□□ -1.9
MDM2-228ENST00000542502 ZNF492Q9P255 531 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 GNG13Q9P2W3 67 aa3.16□□□□□ -1.9
MDM2-228ENST00000542502 XKRY2A2RUG3 117 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 C7orf71A4D174 169 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 RBFOX3A6NFN3 312 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 LYRM9A8MSI8 78 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 FABP5P3A8MUU1 101 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 KLLNB2CW77 178 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 GGTLC3B5MD39 225 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 H3BTX0 84 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 M0R3E3 92 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 ZNF705DP0CH99 300 aaPredicted RBP3.15□□□□□ -1.91
MDM2-228ENST00000542502 ZNF705BP0CI00 300 aaPredicted RBP3.15□□□□□ -1.91
MDM2-228ENST00000542502 BCL2P10415 239 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 AKR1C3P42330 323 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 NKX2-5P52952 324 aaPredicted RBP3.15□□□□□ -1.91
MDM2-228ENST00000542502 CD300CQ08708 224 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 PEA15Q15121 130 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 TMEM183BQ1AE95 376 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 DEFB135Q30KP9 77 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 FAM74A3Q4VXF1 159 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 GDF5OSQ5U4N7 250 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 FAM159AQ6UWV7 190 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 CSNK1G2-AS1Q8NCQ2 148 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 OR11H2Q8NH07 326 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 TMEM263Q8WUH6 116 aaKnown RBP3.15□□□□□ -1.91
MDM2-228ENST00000542502 C11orf52Q96A22 123 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 C16orf74Q96GX8 76 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 FAM19A4Q96LR4 140 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 SPXQ9BT56 116 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 NDUFAF3Q9BU61 184 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 EIF5A2Q9GZV4 153 aaKnown RBP3.15□□□□□ -1.91
MDM2-228ENST00000542502 WFDC10AQ9H1F0 79 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 TREM1Q9NP99 234 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 XCL2Q9UBD3 114 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 TP53TG3Q9ULZ0 132 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 PSG8Q9UQ74 426 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 TENM2Q9NT68 2774 aa3.15□□□□□ -1.91
MDM2-228ENST00000542502 IGKV2-40A0A087WW87 121 aaPredicted RBP3.14□□□□□ -1.91
MDM2-228ENST00000542502 RAB19A4D1S5 217 aa3.14□□□□□ -1.91
MDM2-228ENST00000542502 F6UB75 175 aa3.14□□□□□ -1.91
MDM2-228ENST00000542502 IGKV2D-40P01614 121 aaPredicted RBP3.14□□□□□ -1.91
MDM2-228ENST00000542502 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
MDM2-228ENST00000542502 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms