RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PCP4P48539 62 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 NMUP48645 174 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 LAGE3Q14657 143 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 SMIM15Q7Z3B0 74 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 ZFAND2AQ8N6M9 145 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 LINC00482Q8N8I6 264 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 FOXC2Q99958 501 aa3.94□□□□□ -1.78
ATPAF1-212ENST00000542495 SPTAN1Q13813 2472 aaKnown RBP3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 A0A087WX48 190 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 A0A0G2JLM5 398 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 GAGE10A6NGK3 116 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 K7EMI3 77 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV4-39P01824 125 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 ARL3P36405 182 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 UNQ9165/PRO28630Q6UXU0 137 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 GTF2H5Q6ZYL4 71 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 TMEM219Q86XT9 240 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 PHLDA1Q8WV24 401 aaPredicted RBP3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 C20orf78Q9BR46 151 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 SMIM2Q9BVW6 85 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 TM2D2Q9BX73 214 aa3.93□□□□□ -1.78
ATPAF1-212ENST00000542495 NOTCH2Q04721 2471 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TRBV25-1A0A075B6N4 114 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TRAV26-2A0A0B4J265 109 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TRAV21A0A0B4J279 112 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 A0A1W2PPM0 123 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 A6NDX4 124 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 H3BUT2 72 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 H3BVH4 76 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 C19orf84I3L1E1 186 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 M0R381 172 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 NXPH4O95158 308 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TRBV12-3P01733 135 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHG2P01859 326 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 SLC25A16P16260 332 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TCTAP57738 103 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 ZC2HC1BQ5TFG8 222 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 SPANXN1Q5VSR9 72 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 MYOZ3Q8TDC0 251 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 RASL10AQ92737 203 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 USMG5Q96IX5 58 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 CHAC1Q9BUX1 264 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 UTP20O75691 2785 aaKnown RBP3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 LRBAP50851 2863 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TACC2O95359 2948 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 CREBBPQ92793 2442 aa3.92□□□□□ -1.78
ATPAF1-212ENST00000542495 TRAV40A0A0B4J280 105 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 LINC01619G3V211 115 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 SMIM13P0DJ93 91 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 PLNP26678 52 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 FXYD2P54710 66 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 TAL2Q16559 108 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 ORMDL2Q53FV1 153 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 NEGR1Q7Z3B1 354 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 GTSCR1Q86UQ5 136 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 MAPKAPK5-AS1Q8N8E1 139 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 OR5A1Q8NGJ0 315 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 OR10J6PQ8NGY7 276 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 TOMM6Q96B49 74 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 TTTY13Q9BZ97 58 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 LINC00527Q9UJ94 153 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 ZNF580Q9UK33 172 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 UFC1Q9Y3C8 167 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 UNC79Q9P2D8 2635 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 HIVEP3Q5T1R4 2406 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 MYO9AB2RTY4 2548 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 WNK2Q9Y3S1 2297 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV3OR16-10A0A075B7F0 116 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 F8VRH5 84 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 H7C1H1 209 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 K7ERU9 68 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 RNASE3P12724 160 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 ASIPP42127 132 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 SUMO2P61956 95 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 RPL32P62910 135 aaKnown RBP3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 CFHR3Q02985 330 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 ANXA2RQ3ZCQ2 193 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 CEND1Q8N111 149 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 DPH3P1Q9H4G8 78 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 FAM30AQ9NZY2 134 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 KIF25-AS1Q9Y6Z4 181 aa3.91□□□□□ -1.78
ATPAF1-212ENST00000542495 CSMD1Q96PZ7 3565 aa3.9□□□□□ -1.78
ATPAF1-212ENST00000542495 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.78
ATPAF1-212ENST00000542495 IGHV4OR15-8A0A075B7B6 117 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 A0A087WW49 117 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 KLLNB2CW77 178 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 E9PLD3 99 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 K7EMT4 169 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 NDUFS8O00217 210 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 IGHV4-38-2P0DP08 117 aa3.9□□□□□ -1.79
ATPAF1-212ENST00000542495 FABP2P12104 132 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms