RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 EP400Q96L91 3159 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
SMARCA4-207ENST00000541122 ELANEP08246 267 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 ZNF407Q9C0G0 2248 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 EML6Q6ZMW3 1958 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 BUB3O43684 328 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 CITED2Q99967 270 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 ROS1P08922 2347 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 ZNF503Q96F45 646 aa11.63□□□□□ -0.55
SMARCA4-207ENST00000541122 LGALS9O00182 355 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 CRYGCP07315 174 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 CTSGP08311 255 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 IGKV2-29A2NJV5 120 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 JMJD7-PLA2G4BH0Y9G9 81 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 RS1O15537 224 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 C16orf54Q6UWD8 224 aa11.62□□□□□ -0.55
SMARCA4-207ENST00000541122 IGLV2-23P01705 113 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 IGHG2P01859 326 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 NBL1P41271 181 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 RNF183Q96D59 192 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 SND1-IT1Q9HBX3 110 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 PSMB8P28062 276 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 TICRRQ7Z2Z1 1910 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 POLEQ07864 2286 aa11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 NDUFV3P56181 108 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-207ENST00000541122 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
SMARCA4-207ENST00000541122 hADV29S1A0JD25 119 aa11.6□□□□□ -0.55
SMARCA4-207ENST00000541122 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
SMARCA4-207ENST00000541122 ABCA1O95477 2261 aa11.6□□□□□ -0.55
SMARCA4-207ENST00000541122 COL4A3Q01955 1670 aa11.6□□□□□ -0.55
SMARCA4-207ENST00000541122 TEX22C9J3V5 150 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 HOXB4P17483 251 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 TCL1BO95988 128 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 CFHR3Q02985 330 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 TP53TG3Q9ULZ0 132 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 J3QLI3 93 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 DENND4CQ5VZ89 1909 aa11.59□□□□□ -0.55
SMARCA4-207ENST00000541122 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 DAD1P61803 113 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 PTH2Q96A98 100 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 U3KQE9 123 aa11.58□□□□□ -0.56
SMARCA4-207ENST00000541122 TRIOBPQ9H2D6 2365 aa11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 OBSL1O75147 1896 aa11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 PRSS33Q8NF86 280 aa11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 IGHV1-58A0A0C4DH39 117 aa11.57□□□□□ -0.56
SMARCA4-207ENST00000541122 MT-ATP8P03928 68 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 CRYGBP07316 175 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 LOXL1Q08397 574 aaPredicted RBP11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 IGKV1D-37A0A075B6S9 117 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 TRAV4A0A0B4J268 109 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 UQCRQO14949 82 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 Q8N1Y9 231 aa11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 MRPL36Q9P0J6 103 aaKnown RBP11.56□□□□□ -0.56
SMARCA4-207ENST00000541122 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 DOCK7Q96N67 2140 aa11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 RITA1Q96K30 269 aa11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 F5H768 121 aa11.55□□□□□ -0.56
SMARCA4-207ENST00000541122 KIAA1671Q9BY89 1806 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 CLEC2BQ92478 149 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 LY6DQ14210 128 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 SPRNQ5BIV9 151 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 VSIG2Q96IQ7 327 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 MIAQ16674 131 aa11.54□□□□□ -0.56
SMARCA4-207ENST00000541122 IGLC6P0CF74 106 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 SPRY2O43597 315 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 C20orf203Q8NBC4 194 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 ARFGEF3Q5TH69 2177 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 GNLYP22749 145 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
SMARCA4-207ENST00000541122 K7EQD1 137 aa11.52□□□□□ -0.56
SMARCA4-207ENST00000541122 IGLV1-47P01700 117 aa11.52□□□□□ -0.56
SMARCA4-207ENST00000541122 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.56
SMARCA4-207ENST00000541122 Q6ZPA2 131 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms