RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MRPL23Q16540 153 aaKnown RBP9.05□□□□□ -0.96
LTBR-208ENST00000541005 ZNF506Q5JVG8 444 aa9.05□□□□□ -0.96
LTBR-208ENST00000541005 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
LTBR-208ENST00000541005 RTL8CO15255 209 aa9.04□□□□□ -0.96
LTBR-208ENST00000541005 ORM1P02763 201 aa9.04□□□□□ -0.96
LTBR-208ENST00000541005 GATA1P15976 413 aaPredicted RBP9.04□□□□□ -0.96
LTBR-208ENST00000541005 MEF2BQ02080 365 aaPredicted RBP9.04□□□□□ -0.96
LTBR-208ENST00000541005 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
LTBR-208ENST00000541005 ZNF575Q86XF7 245 aa9.04□□□□□ -0.96
LTBR-208ENST00000541005 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 C9JCJ5 164 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 K7EQD1 137 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 IFNA1P01562 189 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 CXCL1P09341 107 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 BCL2P10415 239 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 S100A4P26447 101 aaKnown RBP9.03□□□□□ -0.96
LTBR-208ENST00000541005 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
LTBR-208ENST00000541005 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
LTBR-208ENST00000541005 BAGE2Q86Y30 109 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 NHLRC2Q8NBF2 726 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 Q9H8V8 135 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
LTBR-208ENST00000541005 EPPK1P58107 5090 aaKnown RBP9.02□□□□□ -0.97
LTBR-208ENST00000541005 A8MWV9 139 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 H3BVH4 76 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 M0R036 132 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 PDE6DO43924 150 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 GYPEP15421 78 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 NEGR1Q7Z3B1 354 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 PCNPQ8WW12 178 aaKnown RBP9.02□□□□□ -0.97
LTBR-208ENST00000541005 SMIM12Q96EX1 92 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
LTBR-208ENST00000541005 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 A0A1W2PPQ1 181 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 MED14OSP0DP75 135 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 SRIP30626 198 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 SOHLH1Q5JUK2 328 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 ALKAL2Q6UX46 152 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 SH2D6Q7Z4S9 175 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 PARLQ9H300 379 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 VAX2Q9UIW0 290 aa9.01□□□□□ -0.97
LTBR-208ENST00000541005 ARMS2P0C7Q2 107 aa9□□□□□ -0.97
LTBR-208ENST00000541005 MGST1P10620 155 aaKnown RBP9□□□□□ -0.97
LTBR-208ENST00000541005 NKX2-5P52952 324 aaPredicted RBP9□□□□□ -0.97
LTBR-208ENST00000541005 CENPWQ5EE01 88 aa9□□□□□ -0.97
LTBR-208ENST00000541005 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
LTBR-208ENST00000541005 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
LTBR-208ENST00000541005 SLC25A29Q8N8R3 303 aa9□□□□□ -0.97
LTBR-208ENST00000541005 SYT8Q8NBV8 401 aa9□□□□□ -0.97
LTBR-208ENST00000541005 A0A1B0GVY2 172 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 GRIFINA4D1Z8 144 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 NXPH4O95158 308 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
LTBR-208ENST00000541005 TIRAPP58753 221 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 BLOC1S1P78537 153 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 RHOHQ15669 191 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 KRTAP1-5Q9BYS1 174 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
LTBR-208ENST00000541005 TMSB15BA0A087X1C1 80 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 PRSS29PA6NIE9 313 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 RHODO00212 210 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 IGLV2-8P01709 118 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 ZFP82Q8N141 532 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
LTBR-208ENST00000541005 HECTD4Q9Y4D8 3996 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 TRBV20OR9-2A0A075B6H5 130 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 SIVA1O15304 175 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 GNG4P50150 75 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 RPL19P84098 196 aaKnown RBP8.97□□□□□ -0.97
LTBR-208ENST00000541005 PRR27Q6MZM9 219 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
LTBR-208ENST00000541005 MED9Q9NWA0 146 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 DNAH2Q9P225 4427 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 DNAH17Q9UFH2 4485 aa8.97□□□□□ -0.97
LTBR-208ENST00000541005 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 RAB19A4D1S5 217 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 SNAI2O43623 268 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 OR5AL1P0C617 328 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 SFRP2Q96HF1 295 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 SAMD10Q9BYL1 202 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 JPT2Q9H910 190 aa8.96□□□□□ -0.98
LTBR-208ENST00000541005 C19orf71A6NCJ1 209 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 TMEM250H0YL14 139 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 K7EP13 123 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 M0R381 172 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
LTBR-208ENST00000541005 Q6ZSN1 163 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 BIN3Q9NQY0 253 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 BIRC6Q9NR09 4857 aa8.95□□□□□ -0.98
LTBR-208ENST00000541005 RBFOX3A6NFN3 312 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms