RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 OR2G3Q8NGZ4 309 aa17.66■□□□□ 0.42
CHFR-218ENST00000540963 SUN5Q8TC36 379 aa17.66■□□□□ 0.42
CHFR-218ENST00000540963 PTH2Q96A98 100 aa17.66■□□□□ 0.42
CHFR-218ENST00000540963 RPH3ALQ9UNE2 315 aa17.66■□□□□ 0.42
CHFR-218ENST00000540963 A0A1W2PPV4 95 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 PTTG1O95997 202 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 STAG3L2P0CL84 134 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 STAG3L3P0CL85 134 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 KRTAP10-4P60372 401 aaPredicted RBP17.65■□□□□ 0.42
CHFR-218ENST00000540963 HSD17B11Q8NBQ5 300 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 UBR4Q5T4S7 5183 aa17.65■□□□□ 0.42
CHFR-218ENST00000540963 ARL14EPLP0DKL9 152 aa17.64■□□□□ 0.41
CHFR-218ENST00000540963 ATP6V0CP27449 155 aa17.64■□□□□ 0.41
CHFR-218ENST00000540963 SGK494Q96LW2 274 aa17.64■□□□□ 0.41
CHFR-218ENST00000540963 CHAC1Q9BUX1 264 aa17.64■□□□□ 0.41
CHFR-218ENST00000540963 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.63■□□□□ 0.41
CHFR-218ENST00000540963 F6UZH7 168 aa17.63■□□□□ 0.41
CHFR-218ENST00000540963 DPPA3Q6W0C5 159 aa17.63■□□□□ 0.41
CHFR-218ENST00000540963 RAB24Q969Q5 203 aa17.63■□□□□ 0.41
CHFR-218ENST00000540963 MED28Q9H204 178 aa17.63■□□□□ 0.41
CHFR-218ENST00000540963 LECT2O14960 151 aa17.62■□□□□ 0.41
CHFR-218ENST00000540963 C11orf21Q9P2W6 132 aa17.62■□□□□ 0.41
CHFR-218ENST00000540963 GGTLC3B5MD39 225 aa17.61■□□□□ 0.41
CHFR-218ENST00000540963 CDC34P49427 236 aaPredicted RBP17.61■□□□□ 0.41
CHFR-218ENST00000540963 ZNF80P51504 273 aaPredicted RBP17.61■□□□□ 0.41
CHFR-218ENST00000540963 Q8N976 141 aa17.61■□□□□ 0.41
CHFR-218ENST00000540963 C9orf85Q96MD7 179 aa17.61■□□□□ 0.41
CHFR-218ENST00000540963 PSMG3Q9BT73 122 aaPredicted RBP17.61■□□□□ 0.41
CHFR-218ENST00000540963 PLA2G2DQ9UNK4 145 aa17.61■□□□□ 0.41
CHFR-218ENST00000540963 IGHV3-73A0A0B4J1V6 119 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 RNF222A6NCQ9 220 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 IGLV2-11P01706 119 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 RMI2Q96E14 147 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 NDFIP1Q9BT67 221 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 FAT3Q8TDW7 4589 aa17.6■□□□□ 0.41
CHFR-218ENST00000540963 A0A087WWC5 75 aa17.59■□□□□ 0.41
CHFR-218ENST00000540963 RBFOX3A6NFN3 312 aa17.59■□□□□ 0.41
CHFR-218ENST00000540963 GCHFRP30047 84 aa17.59■□□□□ 0.41
CHFR-218ENST00000540963 Q8N3U1 123 aa17.59■□□□□ 0.41
CHFR-218ENST00000540963 BAALCQ8WXS3 180 aa17.59■□□□□ 0.41
CHFR-218ENST00000540963 SERTM2A0A1B0GWG4 89 aa17.58■□□□□ 0.4
CHFR-218ENST00000540963 G3V3Q6 166 aa17.58■□□□□ 0.4
CHFR-218ENST00000540963 TAAR5O14804 337 aa17.58■□□□□ 0.4
CHFR-218ENST00000540963 LINC00694P0DN24 101 aa17.58■□□□□ 0.4
CHFR-218ENST00000540963 DAZ4Q86SG3 579 aaKnown RBP17.58■□□□□ 0.4
CHFR-218ENST00000540963 DAZ3Q9NR90 486 aaKnown RBP17.58■□□□□ 0.4
CHFR-218ENST00000540963 TCRAP04437 139 aa17.57■□□□□ 0.4
CHFR-218ENST00000540963 GIPP09681 153 aaPredicted RBP17.57■□□□□ 0.4
CHFR-218ENST00000540963 SEC11BP0C7V7 166 aa17.57■□□□□ 0.4
CHFR-218ENST00000540963 ZNF506Q5JVG8 444 aa17.57■□□□□ 0.4
CHFR-218ENST00000540963 RPL7L1Q6DKI1 246 aaKnown RBP17.57■□□□□ 0.4
CHFR-218ENST00000540963 ZFP2Q6ZN57 461 aa17.57■□□□□ 0.4
CHFR-218ENST00000540963 PGPEP1LA6NFU8 196 aa17.56■□□□□ 0.4
CHFR-218ENST00000540963 IGLV2-8P01709 118 aa17.56■□□□□ 0.4
CHFR-218ENST00000540963 ZNF726P1Q15940 193 aa17.56■□□□□ 0.4
CHFR-218ENST00000540963 LINC01620Q4KN68 170 aa17.56■□□□□ 0.4
CHFR-218ENST00000540963 PIK3CD-AS1Q5SR53 167 aa17.56■□□□□ 0.4
CHFR-218ENST00000540963 SERF2P84101 59 aa17.55■□□□□ 0.4
CHFR-218ENST00000540963 CIRBP-AS1Q8TBR5 109 aa17.55■□□□□ 0.4
CHFR-218ENST00000540963 SUMO1P63165 101 aaKnown RBP17.54■□□□□ 0.4
CHFR-218ENST00000540963 CYB561D1Q8N8Q1 229 aa17.54■□□□□ 0.4
CHFR-218ENST00000540963 C5orf17Q8NAS9 161 aa17.54■□□□□ 0.4
CHFR-218ENST00000540963 TNFSF18Q9UNG2 199 aa17.54■□□□□ 0.4
CHFR-218ENST00000540963 A8MWV9 139 aa17.53■□□□□ 0.4
CHFR-218ENST00000540963 EPDR1Q9UM22 224 aa17.53■□□□□ 0.4
CHFR-218ENST00000540963 PSG8Q9UQ74 426 aa17.53■□□□□ 0.4
CHFR-218ENST00000540963 RNASE3P12724 160 aaKnown RBP17.52■□□□□ 0.4
CHFR-218ENST00000540963 FGF8P55075 233 aaPredicted RBP17.52■□□□□ 0.4
CHFR-218ENST00000540963 TMEM75Q8N9X5 138 aa17.52■□□□□ 0.4
CHFR-218ENST00000540963 PARLQ9H300 379 aa17.52■□□□□ 0.4
CHFR-218ENST00000540963 URGCP-MRPS24S4R325 110 aa17.52■□□□□ 0.4
CHFR-218ENST00000540963 GAGE12JA6NER3 117 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 GAGE1Q13065 139 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 GAGE4Q13068 117 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 GAGE5Q13069 117 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 GAGE13Q4V321 117 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 LINC00479Q96M42 142 aa17.51■□□□□ 0.39
CHFR-218ENST00000540963 K7EQM0 130 aa17.5■□□□□ 0.39
CHFR-218ENST00000540963 GCGP01275 180 aa17.5■□□□□ 0.39
CHFR-218ENST00000540963 MBP02144 154 aa17.5■□□□□ 0.39
CHFR-218ENST00000540963 ACTR3CQ9C0K3 210 aaPredicted RBP17.5■□□□□ 0.39
CHFR-218ENST00000540963 CXorf1O96002 111 aa17.49■□□□□ 0.39
CHFR-218ENST00000540963 IGKV2D-24A0A075B6R9 120 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 FXYD6-FXYD2A0A087WZ82 144 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 FLI1Q01543 452 aaPredicted RBP17.48■□□□□ 0.39
CHFR-218ENST00000540963 ZFP69Q49AA0 526 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 SMUG1Q53HV7 270 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 NIT1Q86X76 327 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 OR2T35Q8NGX2 323 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 CHCHD7Q9BUK0 85 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 CYTL1Q9NRR1 136 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 TMEM167BQ9NRX6 74 aa17.48■□□□□ 0.39
CHFR-218ENST00000540963 PKHD1L1Q86WI1 4243 aa17.47■□□□□ 0.39
CHFR-218ENST00000540963 ATRAIDQ6UW56 229 aa17.47■□□□□ 0.39
CHFR-218ENST00000540963 PRNTQ86SH4 94 aa17.47■□□□□ 0.39
CHFR-218ENST00000540963 TRAV34A0A0B4J273 112 aa17.46■□□□□ 0.39
CHFR-218ENST00000540963 ELOBQ15370 118 aa17.46■□□□□ 0.39
CHFR-218ENST00000540963 C14orf177Q52M58 125 aa17.46■□□□□ 0.39
CHFR-218ENST00000540963 INO80EQ8NBZ0 244 aaPredicted RBP17.46■□□□□ 0.39
CHFR-218ENST00000540963 A0A1W2PRE2 83 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms