RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CD7P09564 240 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 GATA1P15976 413 aaPredicted RBP9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 RAB4AP20338 218 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 ASIPP42127 132 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 KCNS1Q96KK3 526 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 MDFICQ9P1T7 246 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 VWFP04275 2813 aa9.02□□□□□ -0.97
AP003559.1-201ENST00000540906 M0R381 172 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 PMCHP20382 165 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 NIT1Q86X76 327 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 IGHV3-16A0A0C4DH30 117 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 PF4P02776 101 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 S100A4P26447 101 aaKnown RBP9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 PMCHL1Q16048 86 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 DNLZQ5SXM8 178 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 RNASEKQ6P5S7 137 aaKnown RBP9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 FAM159AQ6UWV7 190 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 Q6ZWC4 215 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 CITED1Q99966 193 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
AP003559.1-201ENST00000540906 NPYP01303 97 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 SMIM6P0DI80 62 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 TSPOP30536 169 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 TDRG1Q3Y452 100 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 SPANXN1Q5VSR9 72 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 Q8N1Y9 231 aa9□□□□□ -0.97
AP003559.1-201ENST00000540906 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
AP003559.1-201ENST00000540906 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
AP003559.1-201ENST00000540906 TRAV26-2A0A0B4J265 109 aa8.99□□□□□ -0.97
AP003559.1-201ENST00000540906 BEAN1Q3B7T3 259 aa8.99□□□□□ -0.97
AP003559.1-201ENST00000540906 KRTAP24-1Q3LI83 254 aa8.99□□□□□ -0.97
AP003559.1-201ENST00000540906 JPT2Q9H910 190 aa8.99□□□□□ -0.97
AP003559.1-201ENST00000540906 OR11H12B2RN74 326 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 AMTP48728 403 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 CACNG7P62955 275 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 PRELID3AQ96N28 172 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 TRRAPQ9Y4A5 3859 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 NXPH4O95158 308 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 TRPT1Q86TN4 253 aaKnown RBP8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 SAMD10Q9BYL1 202 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 PHLDA3Q9Y5J5 127 aa8.98□□□□□ -0.97
AP003559.1-201ENST00000540906 CKS2P33552 79 aa8.97□□□□□ -0.97
AP003559.1-201ENST00000540906 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
AP003559.1-201ENST00000540906 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
AP003559.1-201ENST00000540906 C14orf178Q8N769 122 aaPredicted RBP8.97□□□□□ -0.97
AP003559.1-201ENST00000540906 HTN1P15515 57 aa8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 JOSD1Q15040 202 aaPredicted RBP8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 NIT2Q9NQR4 276 aa8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 XCL2Q9UBD3 114 aa8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.97
AP003559.1-201ENST00000540906 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.98
AP003559.1-201ENST00000540906 LINC00315P59091 139 aa8.96□□□□□ -0.98
AP003559.1-201ENST00000540906 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 LINC00614P0C842 121 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 STHQ8IWL8 128 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 NRACQ8N912 160 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 Q8N976 141 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 OR2K2Q8NGT1 345 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 CMYA5Q8N3K9 4069 aa8.95□□□□□ -0.98
AP003559.1-201ENST00000540906 A0A096LNJ9 63 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 CBY3A6NI87 242 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 HSBP1O75506 76 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 A0A087WWL8 130 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 RPL35AP18077 110 aaKnown RBP8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
AP003559.1-201ENST00000540906 NOTCH3Q9UM47 2321 aa8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 MGPP08493 103 aa8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 AZU1P20160 251 aa8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 DEFB125Q8N687 156 aa8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 CHCHD1Q96BP2 118 aaKnown RBP8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 RPL39LQ96EH5 51 aaKnown RBP8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 DPH3P1Q9H4G8 78 aa8.93□□□□□ -0.98
AP003559.1-201ENST00000540906 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 INSP01308 110 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 KRTDAPP60985 99 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 C11orf72Q8NBR9 251 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 PRSS3P2Q8NHM4 247 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 RASL10AQ92737 203 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 LINC01587Q99440 93 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 MDFIQ99750 246 aa8.92□□□□□ -0.98
AP003559.1-201ENST00000540906 IGLV2-18A0A075B6J9 118 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 POM121L12Q8N7R1 296 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 AP1S3Q96PC3 154 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 GSN-AS1Q9NRJ2 163 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 IGHV3OR16-12A0A075B7B8 117 aa8.91□□□□□ -0.98
AP003559.1-201ENST00000540906 COL6A5A8TX70 2615 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms