RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
CD9-209ENST00000540891 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
CD9-209ENST00000540891 TEX46H3BTG2 121 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 RTL8CO15255 209 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 ASIPP42127 132 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 LINC01559Q495D7 138 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 DNLZQ5SXM8 178 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 BAGE2Q86Y30 109 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 UPK3BQ9BT76 320 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 DERL1Q9BUN8 251 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
CD9-209ENST00000540891 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
CD9-209ENST00000540891 GRIFINA4D1Z8 144 aa11.64□□□□□ -0.55
CD9-209ENST00000540891 S100A4P26447 101 aaKnown RBP11.64□□□□□ -0.55
CD9-209ENST00000540891 RPL35P42766 123 aaKnown RBP11.64□□□□□ -0.55
CD9-209ENST00000540891 TXNDC17Q9BRA2 123 aa11.64□□□□□ -0.55
CD9-209ENST00000540891 IL36BQ9NZH7 164 aa11.64□□□□□ -0.55
CD9-209ENST00000540891 NBDYA0A0U1RRE5 68 aa11.63□□□□□ -0.55
CD9-209ENST00000540891 H3BVH4 76 aa11.63□□□□□ -0.55
CD9-209ENST00000540891 K7EQD1 137 aa11.63□□□□□ -0.55
CD9-209ENST00000540891 BCL2P10415 239 aa11.63□□□□□ -0.55
CD9-209ENST00000540891 GATA1P15976 413 aaPredicted RBP11.63□□□□□ -0.55
CD9-209ENST00000540891 Q9H8V8 135 aa11.63□□□□□ -0.55
CD9-209ENST00000540891 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
CD9-209ENST00000540891 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
CD9-209ENST00000540891 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
CD9-209ENST00000540891 GYPEP15421 78 aa11.62□□□□□ -0.55
CD9-209ENST00000540891 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
CD9-209ENST00000540891 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
CD9-209ENST00000540891 SCRT2Q9NQ03 307 aa11.62□□□□□ -0.55
CD9-209ENST00000540891 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
CD9-209ENST00000540891 IFNA1P01562 189 aa11.61□□□□□ -0.55
CD9-209ENST00000540891 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
CD9-209ENST00000540891 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
CD9-209ENST00000540891 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
CD9-209ENST00000540891 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
CD9-209ENST00000540891 IGLV2-8P01709 118 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 SLC25A29Q8N8R3 303 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 KRTAP1-5Q9BYS1 174 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 PARLQ9H300 379 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 JPT2Q9H910 190 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
CD9-209ENST00000540891 RAB19A4D1S5 217 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 PDE6DO43924 150 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 CIDEAO60543 219 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 SRIP30626 198 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 PRR27Q6MZM9 219 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 SAMD10Q9BYL1 202 aa11.59□□□□□ -0.55
CD9-209ENST00000540891 TRBV20OR9-2A0A075B6H5 130 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 A8MWV9 139 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 BLOC1S1P78537 153 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 Q6ZSN1 163 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 PCNPQ8WW12 178 aaKnown RBP11.58□□□□□ -0.56
CD9-209ENST00000540891 MED9Q9NWA0 146 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 HECTD4Q9Y4D8 3996 aa11.58□□□□□ -0.56
CD9-209ENST00000540891 A0A1B0GVY2 172 aa11.57□□□□□ -0.56
CD9-209ENST00000540891 CXCL1P09341 107 aa11.57□□□□□ -0.56
CD9-209ENST00000540891 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
CD9-209ENST00000540891 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
CD9-209ENST00000540891 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 NXPH4O95158 308 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 MED14OSP0DP75 135 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 MGST1P10620 155 aaKnown RBP11.56□□□□□ -0.56
CD9-209ENST00000540891 TAGLN2P37802 199 aaKnown RBP11.56□□□□□ -0.56
CD9-209ENST00000540891 RHOHQ15669 191 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
CD9-209ENST00000540891 M0R381 172 aa11.55□□□□□ -0.56
CD9-209ENST00000540891 C6orf223Q8N319 242 aa11.55□□□□□ -0.56
CD9-209ENST00000540891 SMIM12Q96EX1 92 aa11.55□□□□□ -0.56
CD9-209ENST00000540891 PRADC1Q9BSG0 188 aa11.55□□□□□ -0.56
CD9-209ENST00000540891 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
CD9-209ENST00000540891 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 SIVA1O15304 175 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 SNAI2O43623 268 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 GNG4P50150 75 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 ZFP82Q8N141 532 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 OR10AG1Q8NH19 301 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 SFRP2Q96HF1 295 aa11.54□□□□□ -0.56
CD9-209ENST00000540891 A0A1W2PPQ1 181 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 RBFOX3A6NFN3 312 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 CRYGDP07320 174 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 SOHLH1Q5JUK2 328 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 Q9UF83 564 aa11.53□□□□□ -0.56
CD9-209ENST00000540891 A0A087WWL8 130 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 RHODO00212 210 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 LINC00694P0DN24 101 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 TIRAPP58753 221 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.57
CD9-209ENST00000540891 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms