RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 PFN1P07737 140 aaKnown RBP7.85□□□□□ -1.15
YBX3-207ENST00000539204 FGF7P21781 194 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 ERCC8Q13216 396 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 GUK1Q16774 197 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 RASL10AQ92737 203 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 NPCDR1Q9BY65 106 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 TREM1Q9NP99 234 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 KCNIP2Q9NS61 270 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 COX11Q9Y6N1 276 aa7.85□□□□□ -1.15
YBX3-207ENST00000539204 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
YBX3-207ENST00000539204 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
YBX3-207ENST00000539204 FAM19A4Q96LR4 140 aa7.84□□□□□ -1.15
YBX3-207ENST00000539204 PAXXQ9BUH6 204 aa7.84□□□□□ -1.15
YBX3-207ENST00000539204 DPH3P1Q9H4G8 78 aa7.84□□□□□ -1.15
YBX3-207ENST00000539204 H3BQ15 152 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 RPL29P47914 159 aaKnown RBP7.83□□□□□ -1.16
YBX3-207ENST00000539204 RAB31Q13636 194 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 ZNF506Q5JVG8 444 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 AGPAT4-IT1Q9H0P7 198 aa7.83□□□□□ -1.16
YBX3-207ENST00000539204 CTXND1A0A1B0GTU2 59 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 F8W036 122 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 APOC3P02656 99 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
YBX3-207ENST00000539204 CCL20P78556 96 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 FFAR4Q5NUL3 377 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 LELP1Q5T871 98 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 Q6ZQT7 251 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 SVBPQ8N300 66 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 ATP6V0E2Q8NHE4 81 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
YBX3-207ENST00000539204 SLC39A9Q9NUM3 307 aa7.82□□□□□ -1.16
YBX3-207ENST00000539204 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 C9JQL5 133 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 AGPAT2O15120 278 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 CRISP2P16562 243 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 ADCYAP1P18509 176 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 MGST2Q99735 147 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 SPXQ9BT56 116 aa7.81□□□□□ -1.16
YBX3-207ENST00000539204 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
YBX3-207ENST00000539204 MAP1LC3B2A6NCE7 125 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 COX7A2P2O60397 106 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 SNAPINO95295 136 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 FAM122CQ6P4D5 195 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 RMI2Q96E14 147 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 MRPL53Q96EL3 112 aaKnown RBP7.8□□□□□ -1.16
YBX3-207ENST00000539204 MAP1LC3BQ9GZQ8 125 aa7.8□□□□□ -1.16
YBX3-207ENST00000539204 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 M0R3E3 92 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 IFNA1P01562 189 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
YBX3-207ENST00000539204 C10orf113Q5VZT2 155 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 ZFAND2AQ8N6M9 145 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 RAB24Q969Q5 203 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 GTSF1LQ9H1H1 148 aa7.79□□□□□ -1.16
YBX3-207ENST00000539204 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 ZNF253O75346 499 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 BCL2P10415 239 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 GATA1P15976 413 aaPredicted RBP7.78□□□□□ -1.16
YBX3-207ENST00000539204 CDC34P49427 236 aaPredicted RBP7.78□□□□□ -1.16
YBX3-207ENST00000539204 MUC21Q5SSG8 566 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 TMEM78Q5T7P6 136 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 PRR9Q5T870 116 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 DAZ4Q86SG3 579 aaKnown RBP7.78□□□□□ -1.16
YBX3-207ENST00000539204 NKX6-2Q9C056 277 aaPredicted RBP7.78□□□□□ -1.16
YBX3-207ENST00000539204 MANBALQ9NQG1 85 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 DAZ3Q9NR90 486 aaKnown RBP7.78□□□□□ -1.16
YBX3-207ENST00000539204 VAX2Q9UIW0 290 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 RPH3ALQ9UNE2 315 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 PRELID1Q9Y255 219 aa7.78□□□□□ -1.16
YBX3-207ENST00000539204 A0A1W2PPV4 95 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 HIST1H1EP10412 219 aaKnown RBP7.77□□□□□ -1.17
YBX3-207ENST00000539204 MIC13Q5XKP0 118 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 ATRAIDQ6UW56 229 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 Q8N3U1 123 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 SUN5Q8TC36 379 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
YBX3-207ENST00000539204 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 IGKV2D-24A0A075B6R9 120 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 A0A1B0GV50 99 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 SCO1O75880 301 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 STAG3L2P0CL84 134 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 STAG3L3P0CL85 134 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 FGF8P55075 233 aaPredicted RBP7.76□□□□□ -1.17
YBX3-207ENST00000539204 TMEM183BQ1AE95 376 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 TMEM183AQ8IXX5 376 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 CLRN3Q8NCR9 226 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 ZNF492Q9P255 531 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 GNG13Q9P2W3 67 aa7.76□□□□□ -1.17
YBX3-207ENST00000539204 TRGV11A0A075B6L2 103 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms