RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CLPSL1A2RUU4 121 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 RNF223E7ERA6 249 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 M0R381 172 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 IGHV3-30P01768 117 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 IGHV3-30-5P0DP03 117 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 C15orf32Q32M92 178 aa14.15□□□□□ -0.14
SFSWAP-207ENST00000538548 SPTBN1Q01082 2364 aaKnown RBP14.14□□□□□ -0.15
SFSWAP-207ENST00000538548 CLEC3BP05452 202 aa14.14□□□□□ -0.15
SFSWAP-207ENST00000538548 CRYGDP07320 174 aa14.14□□□□□ -0.15
SFSWAP-207ENST00000538548 Q8N6K4 173 aa14.14□□□□□ -0.15
SFSWAP-207ENST00000538548 SS18L2Q9UHA2 77 aa14.14□□□□□ -0.15
SFSWAP-207ENST00000538548 C11orf86A6NJI1 115 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 M0QXV9 152 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 SCGB1C2P0DMR2 95 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 ASH1LQ9NR48 2969 aaKnown RBP14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 DCHS2Q6V1P9 2916 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 IGLV4-69A0A075B6H9 119 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 IGHV7-81A0A0B4J1V7 117 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 SRD5A1P18405 259 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 PRR9Q5T870 116 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 PRO1854Q9UHT4 67 aa14.13□□□□□ -0.15
SFSWAP-207ENST00000538548 IGHV3OR16-13A0A075B7E8 117 aa14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 IGHV3-74A0A0B4J1X5 117 aa14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 C14orf178Q8N769 122 aaPredicted RBP14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 PPP1R17O96001 155 aa14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 CSMD1Q96PZ7 3565 aa14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 LENEPQ9Y5L5 61 aa14.12□□□□□ -0.15
SFSWAP-207ENST00000538548 IGHV1-69DA0A0B4J2H0 117 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 DUSP14O95147 198 aaKnown RBP14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 ASIPP42127 132 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 SLC25A20O43772 301 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 TGFAP01135 160 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 Q6ZS46 218 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 ABCA4P78363 2273 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 ARHGAP32A7KAX9 2087 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 M0R1W7 72 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 PRTN3P24158 256 aa14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 FAM110DQ8TAY7 271 aaPredicted RBP14.11□□□□□ -0.15
SFSWAP-207ENST00000538548 EBI3Q14213 229 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 METTL26Q96S19 204 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 PHLDA3Q9Y5J5 127 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 RHODO00212 210 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 TSHBP01222 138 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 MGPP08493 103 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 S100A4P26447 101 aaKnown RBP14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
SFSWAP-207ENST00000538548 PKD1L2Q7Z442 2459 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 FAM90A27PA6NNH2 459 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 NHLRC4P0CG21 123 aaPredicted RBP14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 PMVKQ15126 192 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 KLK9Q2XQG4 91 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 Q8NA96 180 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 TIMD4Q96H15 378 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 KLK9Q9UKQ9 250 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 SVEP1Q4LDE5 3571 aa14.09□□□□□ -0.15
SFSWAP-207ENST00000538548 ZFYVE26Q68DK2 2539 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 ACACBO00763 2458 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 IGHV3-49A0A0A0MS15 119 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 CD3EP07766 207 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 TSPEAR-AS2P59090 65 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 IGIPA6NJ69 53 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 B5MCH6 92 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 SPRY2O43597 315 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 EMP1P54849 157 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 GPHB5Q86YW7 130 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 CCDC140Q96MF4 163 aa14.08□□□□□ -0.16
SFSWAP-207ENST00000538548 TRAV21A0A0B4J279 112 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 OOSP1A8MZH6 123 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 C9JAW5 83 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 GAGE2BQ13066 116 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 GAGE2EQ4V326 116 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 CLEC19AQ6UXS0 136 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 VMO1Q7Z5L0 202 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 C16orf92Q96LL3 132 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 GAGE2DQ9UEU5 116 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 TP53TG1Q9Y2A0 90 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 IGF1P05019 195 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 MED14OSP0DP75 135 aa14.07□□□□□ -0.16
SFSWAP-207ENST00000538548 SNCGO76070 127 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 RPL32P62910 135 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 ECSCRQ19T08 205 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 ZFAND2AQ8N6M9 145 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 Q8N9W7 124 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 U3KQE9 123 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 J3KRW8 73 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 TMEM141Q96I45 108 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 AMELXQ99217 191 aa14.06□□□□□ -0.16
SFSWAP-207ENST00000538548 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 NDUFV3P56181 108 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 C9orf139Q6ZV77 190 aa14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 LINC00477Q96M19 166 aa14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 TMEM170BQ5T4T1 132 aa14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 POM121L12Q8N7R1 296 aa14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 ITLN2Q8WWU7 325 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-207ENST00000538548 CRIP2P52943 208 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 TIMM17AQ99595 171 aa14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 J3QQQ9 107 aa14.04□□□□□ -0.16
SFSWAP-207ENST00000538548 IGHV3-33P01772 117 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms