RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TMEM191AQ9H0A3 160 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 PEMTQ9UBM1 199 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 CD7P09564 240 aa10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 A0A1B0GW15 77 aa10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1BA6NDE4 496 aaKnown RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1EA6NEQ0 496 aaKnown RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 RBMY1DP0C7P1 496 aaKnown RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-205ENST00000538545 MDFICQ9P1T7 246 aa10.47□□□□□ -0.73
ACTN1-205ENST00000538545 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
ACTN1-205ENST00000538545 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.74
ACTN1-205ENST00000538545 PHLDA3Q9Y5J5 127 aa10.46□□□□□ -0.74
ACTN1-205ENST00000538545 ASIPP42127 132 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 SNAI2O43623 268 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 OR5AL1P0C617 328 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
ACTN1-205ENST00000538545 C7orf71A4D174 169 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 CDKN1BP46527 198 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 S100A12P80511 92 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 FHL3Q13643 280 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 WFDC10AQ9H1F0 79 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 MAP6D1Q9H9H5 199 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-205ENST00000538545 BAHCC1Q9P281 2608 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 PROK1P58294 105 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 Q8N1Y9 231 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 SPATA3Q8NHX4 192 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 U3KQK5 164 aa10.44□□□□□ -0.74
ACTN1-205ENST00000538545 A0A096LNJ9 63 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 ZNF256Q9Y2P7 627 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-205ENST00000538545 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 A0A087WWL8 130 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 TNFRSF6BO95407 300 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 MGPP08493 103 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
ACTN1-205ENST00000538545 H3BMM0 161 aa10.42□□□□□ -0.74
ACTN1-205ENST00000538545 CRXO43186 299 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-205ENST00000538545 SAP30O75446 220 aa10.42□□□□□ -0.74
ACTN1-205ENST00000538545 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
ACTN1-205ENST00000538545 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
ACTN1-205ENST00000538545 CHCHD1Q96BP2 118 aaKnown RBP10.42□□□□□ -0.74
ACTN1-205ENST00000538545 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
ACTN1-205ENST00000538545 OR4C46A6NHA9 309 aa10.41□□□□□ -0.74
ACTN1-205ENST00000538545 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
ACTN1-205ENST00000538545 TCF21O43680 179 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 TMEM160Q9NX00 188 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 TCAPO15273 167 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 LEPP41159 167 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 PKIAP61925 76 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 SAMD13Q5VXD3 122 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 C18orf15Q96N68 181 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 SCRT2Q9NQ03 307 aa10.4□□□□□ -0.74
ACTN1-205ENST00000538545 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 TSTD3H0UI37 97 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 TCTAP57738 103 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 SCGB2A2Q13296 93 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 NEGR1Q7Z3B1 354 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 XCL2Q9UBD3 114 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 IGHV3OR16-12A0A075B7B8 117 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 DDTP30046 118 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 NRACQ8N912 160 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 OR2K2Q8NGT1 345 aa10.39□□□□□ -0.75
ACTN1-205ENST00000538545 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 TRBV7-9A0A0J9YWB2 115 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 CBY3A6NI87 242 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
ACTN1-205ENST00000538545 TMEM70Q9BUB7 260 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 VAMP8Q9BV40 100 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 MAP1LC3AQ9H492 121 aa10.38□□□□□ -0.75
ACTN1-205ENST00000538545 CACNG7P62955 275 aa10.37□□□□□ -0.75
ACTN1-205ENST00000538545 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
ACTN1-205ENST00000538545 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
ACTN1-205ENST00000538545 STAB1Q9NY15 2570 aa10.37□□□□□ -0.75
ACTN1-205ENST00000538545 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
ACTN1-205ENST00000538545 CYSRT1A8MQ03 144 aa10.36□□□□□ -0.75
ACTN1-205ENST00000538545 RASL10AQ92737 203 aa10.36□□□□□ -0.75
ACTN1-205ENST00000538545 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-205ENST00000538545 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
ACTN1-205ENST00000538545 ZNF747Q9BV97 191 aa10.36□□□□□ -0.75
ACTN1-205ENST00000538545 TSPOP30536 169 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 F5H697 171 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 NDUFA7O95182 113 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 LINC00315P59091 139 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms