RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FAM231BA6NCW3 169 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 ADCYAP1P18509 176 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 Q6ZSR3 168 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 GPHB5Q86YW7 130 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 SMR3AQ99954 134 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 BUB3O43684 328 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 TRAV25A0A0B4J276 109 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 FAM110AQ9BQ89 295 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 WI2-2373I1.2A0A1W2PRP0 233 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 TMEM89A2RUT3 159 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 INSL3P51460 131 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 HERVK_113P63121 156 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 SUMO4Q6EEV6 95 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 K7EN84 100 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 IGKV1-17P01599 117 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 C11orf71Q6IPW1 123 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 NBASA2RRP1 2371 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 ODF3BA8MYP8 253 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 C5orf38Q86SI9 138 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 TMEM61Q8N0U2 210 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 Q8N1Y9 231 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 SMIM2Q9BVW6 85 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 SCRT2Q9NQ03 307 aa4.13□□□□□ -1.75
LRP6-203ENST00000538239 UBE2CO00762 179 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 CRYGCP07315 174 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 CDSNQ15517 529 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 C21orf62-AS1Q17RA5 79 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 RNF152Q8N8N0 203 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 C18orf32Q8TCD1 76 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
LRP6-203ENST00000538239 K7EMT4 169 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 SHISA2Q6UWI4 295 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 C11orf45Q8TAV5 145 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 MAP6D1Q9H9H5 199 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 GAGE2DQ9UEU5 116 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 MALRD1Q5VYJ5 2156 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
LRP6-203ENST00000538239 TAL2Q16559 108 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 DEFB105AQ8NG35 78 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 MEGF9Q9H1U4 602 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 DOCK11Q5JSL3 2073 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 IGLV2-14P01704 120 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
LRP6-203ENST00000538239 PATE2Q6UY27 113 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 FAM231DQ6ZW35 169 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 UTF1Q5T230 341 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 C2orf82Q6UX34 121 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 ZNF493Q6ZR52 646 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 Q6ZSV7 163 aa4.12□□□□□ -1.75
LRP6-203ENST00000538239 A8MWP6 167 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
LRP6-203ENST00000538239 CAMK2N2Q96S95 79 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 NDUFA12Q9UI09 145 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 CACNA1HO95180 2353 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 IGHV4-4A0A075B6R2 117 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 TIRAPP58753 221 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
LRP6-203ENST00000538239 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 C10orf99Q6UWK7 81 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 CHD3Q12873 2000 aaKnown RBP4.11□□□□□ -1.75
LRP6-203ENST00000538239 LINC00482Q8N8I6 264 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 IL17DQ8TAD2 202 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 C20orf78Q9BR46 151 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 ZNF503Q96F45 646 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 CCDC140Q96MF4 163 aa4.11□□□□□ -1.75
LRP6-203ENST00000538239 MRPL36Q9P0J6 103 aaKnown RBP4.11□□□□□ -1.75
LRP6-203ENST00000538239 IGHG4P01861 327 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 KRTAP10-9P60411 292 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 GAGE2BQ13066 116 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 DAZ2Q13117 558 aaKnown RBP4.1□□□□□ -1.75
LRP6-203ENST00000538239 DAZ4Q86SG3 579 aaKnown RBP4.1□□□□□ -1.75
LRP6-203ENST00000538239 RNF183Q96D59 192 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 DNAJC30Q96LL9 226 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 DAZ3Q9NR90 486 aaKnown RBP4.1□□□□□ -1.75
LRP6-203ENST00000538239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.1□□□□□ -1.751e-7■■■■■ 28.1
LRP6-203ENST00000538239 FANCD2OSQ96PS1 177 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
LRP6-203ENST00000538239 GAGE2AQ6NT46 116 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 LOC105371267A0A1B0GV96 52 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 ZNF124Q15973 351 aa4.1□□□□□ -1.75
LRP6-203ENST00000538239 COX7A2LO14548 114 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 PRB2P02812 416 aaPredicted RBP4.09□□□□□ -1.75
LRP6-203ENST00000538239 HILS1P60008 231 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 Q0VG73 95 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 KIR3DS1Q14943 382 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.09□□□□□ -1.75
LRP6-203ENST00000538239 C11orf52Q96A22 123 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 C9orf47Q6ZRZ4 202 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 DSCAMO60469 2012 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 KLK12Q9UKR0 248 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 MPV17L2Q567V2 206 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 TMEM263Q8WUH6 116 aaKnown RBP4.09□□□□□ -1.75
LRP6-203ENST00000538239 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.75
LRP6-203ENST00000538239 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms