RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 KIR2DL4Q99706 377 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 SPAG8Q99932 426 aaPredicted RBP4.52□□□□□ -1.69
CHD4-206ENST00000536999 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 TANC2Q9HCD6 1990 aa4.52□□□□□ -1.69
CHD4-206ENST00000536999 MGAM2Q2M2H8 2515 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 INTS1Q8N201 2190 aaKnown RBP4.51□□□□□ -1.69
CHD4-206ENST00000536999 IGLV2-18A0A075B6J9 118 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 TRBV7-3A0A075B6L6 115 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 VCYO14598 125 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 CRLF1O75462 422 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 IGHV3-48P01763 117 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 ACYP1P07311 99 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 S100A4P26447 101 aaKnown RBP4.51□□□□□ -1.69
CHD4-206ENST00000536999 UBE2D1P51668 147 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 WFDC2Q14508 124 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 MSMPQ1L6U9 139 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 DEFB113Q30KQ7 82 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 CFAP126Q5VTH2 177 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 C8orf86Q6ZUL3 223 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 SEM1Q6ZVN7 128 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 GTSCR1Q86UQ5 136 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 SBSPONQ8IVN8 264 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 OR10J6PQ8NGY7 276 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
CHD4-206ENST00000536999 C18orf15Q96N68 181 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 TIMM17AQ99595 171 aa4.51□□□□□ -1.69
CHD4-206ENST00000536999 MRPL35Q9NZE8 188 aaKnown RBP4.51□□□□□ -1.69
CHD4-206ENST00000536999 DOCK10Q96BY6 2186 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 TET2Q6N021 2002 aaPredicted RBP4.5□□□□□ -1.69
CHD4-206ENST00000536999 IGHV4OR15-8A0A075B7B6 117 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 A0A087WW49 117 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 TMSB15BA0A087X1C1 80 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 C11orf86A6NJI1 115 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 ZNF815PA8K554 130 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 M0R3E3 92 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 TIMM23O14925 209 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 BUB3O43684 328 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 SNCGO76070 127 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 BRI3O95415 125 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 P0DMU3 169 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 CD24P25063 80 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 UBE2D3P61077 147 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 UBE2D2P62837 147 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 FAM27E3Q08E93 113 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 GAGE2BQ13066 116 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 PMVKQ15126 192 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 GAGE2EQ4V326 116 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 HIST2H2BDQ6DRA6 164 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 WFDC8Q8IUA0 241 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 C10orf126Q8N4M7 172 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 C8orf49Q96NF6 230 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
CHD4-206ENST00000536999 TPSG1Q9NRR2 321 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 PRO1854Q9UHT4 67 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 PHLDA3Q9Y5J5 127 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 FAM215AQ9Y5M1 114 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 DNAJC13O75165 2243 aa4.5□□□□□ -1.69
CHD4-206ENST00000536999 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.49□□□□□ -1.694e-7■■■■■ 38.8
CHD4-206ENST00000536999 A0A0B4J2C4 111 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 A0A0J9YX75 114 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 FAM240AA0A1B0GVK7 77 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 FAM223BA6NKX1 122 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 H3BTX0 84 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 H3BUA1 57 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 ATP5G1P05496 136 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 CTSGP08311 255 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 ARL3P36405 182 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 RPL13AP40429 203 aaKnown RBP4.49□□□□□ -1.69
CHD4-206ENST00000536999 DLX1P56177 255 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 ATP5G2Q06055 141 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 BSPH1Q075Z2 132 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 LOXL1Q08397 574 aaPredicted RBP4.49□□□□□ -1.69
CHD4-206ENST00000536999 ERCC8Q13216 396 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 HES1Q14469 280 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 FAM106AQ4KMX7 169 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 DUX4L9Q6RFH8 374 aaPredicted RBP4.49□□□□□ -1.69
CHD4-206ENST00000536999 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 FAM223AQ8IWN6 122 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 SLC25A29Q8N8R3 303 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 NRACQ8N912 160 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 SYT8Q8NBV8 401 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 RAX2Q96IS3 184 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 FANCD2OSQ96PS1 177 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 IMUPQ9GZP8 106 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 YAE1D1Q9NRH1 226 aa4.49□□□□□ -1.69
CHD4-206ENST00000536999 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms