RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 IGFL4Q6B9Z1 124 aa11.93□□□□□ -0.5
CHFR-213ENST00000536843 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
CHFR-213ENST00000536843 RNF5Q99942 180 aa11.93□□□□□ -0.5
CHFR-213ENST00000536843 ONECUT1Q9UBC0 465 aa11.93□□□□□ -0.5
CHFR-213ENST00000536843 SPTA1P02549 2419 aa11.93□□□□□ -0.5
CHFR-213ENST00000536843 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 TGFAP01135 160 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 C11orf21Q9P2W6 132 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 C9JAW5 83 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
CHFR-213ENST00000536843 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
CHFR-213ENST00000536843 MFAP4P55083 255 aa11.91□□□□□ -0.5
CHFR-213ENST00000536843 ADORA2A-AS1P86434 159 aa11.91□□□□□ -0.5
CHFR-213ENST00000536843 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
CHFR-213ENST00000536843 S4R3C0 116 aa11.91□□□□□ -0.5
CHFR-213ENST00000536843 Q8N1Y9 231 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 SLC25A29Q8N8R3 303 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 ODF3Q96PU9 254 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 ABCA4P78363 2273 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
CHFR-213ENST00000536843 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
CHFR-213ENST00000536843 CRIP2P52943 208 aaPredicted RBP11.9□□□□□ -0.5
CHFR-213ENST00000536843 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
CHFR-213ENST00000536843 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 ZZEF1O43149 2961 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 NBASA2RRP1 2371 aa11.9□□□□□ -0.5
CHFR-213ENST00000536843 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 HERVK_113P61574 105 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 IGFBPL1Q8WX77 278 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 P0DMU3 169 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 FAM231AP0DMU4 169 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 FAM231CP0DMU5 169 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
CHFR-213ENST00000536843 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 PAPPA-AS1Q5QFB9 102 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 Q6ZQT7 251 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 Q6ZS46 218 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 LY6G5BQ8NDX9 201 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
CHFR-213ENST00000536843 TRPT1Q86TN4 253 aaKnown RBP11.88□□□□□ -0.51
CHFR-213ENST00000536843 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
CHFR-213ENST00000536843 TIMM23O14925 209 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 CLEC3BP05452 202 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 ARL3P36405 182 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 CRYGDP07320 174 aa11.87□□□□□ -0.51
CHFR-213ENST00000536843 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
CHFR-213ENST00000536843 C11orf86A6NJI1 115 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 LY6DQ14210 128 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 C21orf62Q9NYP8 219 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 C1orf122Q6ZSJ8 110 aa11.86□□□□□ -0.51
CHFR-213ENST00000536843 TMEM126AQ9H061 195 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 ATRXP46100 2492 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 ARHGAP32A7KAX9 2087 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 RNF223E7ERA6 249 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 LINC01620Q4KN68 170 aa11.85□□□□□ -0.51
CHFR-213ENST00000536843 TMEM263Q8WUH6 116 aaKnown RBP11.85□□□□□ -0.51
CHFR-213ENST00000536843 LRBAP50851 2863 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 A0A0B4J2C4 111 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 TSPEAR-AS2P59090 65 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 ATXN8Q156A1 80 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 AMELXQ99217 191 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 DPM3Q9P2X0 92 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 EIF4EBP3O60516 100 aaPredicted RBP11.84□□□□□ -0.51
CHFR-213ENST00000536843 C11orf71Q6IPW1 123 aa11.84□□□□□ -0.51
CHFR-213ENST00000536843 M0R381 172 aa11.83□□□□□ -0.52
CHFR-213ENST00000536843 NBR2O15453 112 aa11.83□□□□□ -0.52
CHFR-213ENST00000536843 VPREB3Q9UKI3 123 aa11.83□□□□□ -0.52
CHFR-213ENST00000536843 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 A4D1N5 150 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 LGALS9O00182 355 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 CTSGP08311 255 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 RPL39LQ96EH5 51 aaKnown RBP11.82□□□□□ -0.52
CHFR-213ENST00000536843 DCHS2Q6V1P9 2916 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 TRBV10-2A0A0K0K1G8 114 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
CHFR-213ENST00000536843 TACC2O95359 2948 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 TRAV2A0A0B4J234 112 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 TSHBP01222 138 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 H3BMM0 161 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
CHFR-213ENST00000536843 NPBQ8NG41 125 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
CHFR-213ENST00000536843 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms