RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 SLC25A16P16260 332 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 FXYD2P54710 66 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 RIPPLY3P57055 190 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 PRR9Q5T870 116 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 HIST2H2BCQ6DN03 193 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 HIST2H2BDQ6DRA6 164 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 CEND1Q8N111 149 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 MYOZ3Q8TDC0 251 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 ZNF418Q8TF45 676 aaPredicted RBP4.33□□□□□ -1.72
VPS33A-203ENST00000536212 C20orf78Q9BR46 151 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 TMEM126AQ9H061 195 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 MOB4Q9Y3A3 225 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 TSSC4Q9Y5U2 329 aaPredicted RBP4.33□□□□□ -1.72
VPS33A-203ENST00000536212 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
VPS33A-203ENST00000536212 TRAV21A0A0B4J279 112 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 E9PLD3 99 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 F8VRH5 84 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 H7C1H1 209 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 NDUFA4O00483 81 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 NXPH4O95158 308 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 IGF1P05019 195 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 VPREB1P12018 145 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 ID1P41134 155 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 ATP5J2P56134 94 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 SPANXN1Q5VSR9 72 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 LRRC75A-AS1Q8N1F1 130 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 MAPKAPK5-AS1Q8N8E1 139 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 RASL10AQ92737 203 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 BPESC1Q9GZL8 116 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
VPS33A-203ENST00000536212 ERG28Q9UKR5 140 aa4.32□□□□□ -1.72
VPS33A-203ENST00000536212 TRBV7-3A0A075B6L6 115 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV3OR16-13A0A075B7E8 117 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV3-49A0A0A0MS15 119 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV3-74A0A0B4J1X5 117 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 TRAV40A0A0B4J280 105 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV1-69DA0A0B4J2H0 117 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 A0A1B0GWB2 263 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 H3BVH4 76 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 PPP1R17O96001 155 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV1-69P01742 117 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 FABP2P12104 132 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 PLNP26678 52 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 ORMDL2Q53FV1 153 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 Q6ZQT7 251 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 NRGNQ92686 78 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 USMG5Q96IX5 58 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 DPH3P1Q9H4G8 78 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 MYO15AQ9UKN7 3530 aa4.31□□□□□ -1.72
VPS33A-203ENST00000536212 FREM2Q5SZK8 3169 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 IGHV4OR15-8A0A075B7B6 117 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 A0A087WW49 117 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 TRAV26-2A0A0B4J265 109 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 A6NDX4 124 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 LINC01549A6NIU2 74 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 IGLL5B9A064 214 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.3□□□□□ -1.72
VPS33A-203ENST00000536212 IGHG2P01859 326 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 ASIPP42127 132 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 CFHR3Q02985 330 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 SMAGPQ0VAQ4 97 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 ANXA2RQ3ZCQ2 193 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 UNQ9165/PRO28630Q6UXU0 137 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 Q8N1X5 172 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 OR13C6PQ8NH95 151 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
VPS33A-203ENST00000536212 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 ZNF580Q9UK33 172 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 CYSLTR1Q9Y271 337 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 KIF25-AS1Q9Y6Z4 181 aa4.3□□□□□ -1.72
VPS33A-203ENST00000536212 CFAP54Q96N23 3096 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 FRYLO94915 3013 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 KLLNB2CW77 178 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 K7EMT4 169 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 M0QXV9 152 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 TRBV12-3P01733 135 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 RNASE3P12724 160 aaKnown RBP4.29□□□□□ -1.72
VPS33A-203ENST00000536212 LINC00315P59091 139 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 BAALCQ8WXS3 180 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 Q96MF0 132 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 SCGB3A1Q96QR1 104 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 SS18L2Q9UHA2 77 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
VPS33A-203ENST00000536212 F8W1H4 67 aa4.28□□□□□ -1.72
VPS33A-203ENST00000536212 K7ERJ3 54 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms