RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 G3V4G9 280 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 GNG5P63218 68 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 MCRIP2Q9BUT9 160 aaKnown RBP9.26□□□□□ -0.93
SCARB1-204ENST00000535005 IGHV3OR16-13A0A075B7E8 117 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 A0A087X0K7 114 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 IGHV3-74A0A0B4J1X5 117 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 CT45A10P0DMU9 189 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 GP9P14770 177 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 RPL7P18124 248 aaKnown RBP9.26□□□□□ -0.93
SCARB1-204ENST00000535005 INSL3P51460 131 aa9.26□□□□□ -0.93
SCARB1-204ENST00000535005 IGHV3-66A0A0C4DH42 116 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 MRPS12O15235 138 aaKnown RBP9.25□□□□□ -0.93
SCARB1-204ENST00000535005 FGF6P10767 208 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 DEFB114Q30KQ6 69 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 NEGR1Q7Z3B1 354 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 BOD1L2Q8IYS8 172 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
SCARB1-204ENST00000535005 IGLV1-51P01701 117 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 LINC01559Q495D7 138 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 C9orf66Q5T8R8 295 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 ZNF493Q6ZR52 646 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 OR2K2Q8NGT1 345 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 Q9H3A6 140 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 PKD1L1Q8TDX9 2849 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 TRAV25A0A0B4J276 109 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 WIPF1O43516 503 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 SAP30O75446 220 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 PRR31Q5SQ13 230 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 SIGLEC15Q6ZMC9 328 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 DYNLRB2Q8TF09 96 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 SMAD5-AS1Q9Y6J3 95 aa9.24□□□□□ -0.93
SCARB1-204ENST00000535005 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
SCARB1-204ENST00000535005 K7EQM0 130 aa9.23□□□□□ -0.93
SCARB1-204ENST00000535005 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
SCARB1-204ENST00000535005 LYPD1Q8N2G4 141 aa9.23□□□□□ -0.93
SCARB1-204ENST00000535005 U3KQK5 164 aa9.23□□□□□ -0.93
SCARB1-204ENST00000535005 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
SCARB1-204ENST00000535005 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
SCARB1-204ENST00000535005 CD300EQ496F6 205 aaPredicted RBP9.21□□□□□ -0.93
SCARB1-204ENST00000535005 BLNKQ8WV28 456 aa9.21□□□□□ -0.93
SCARB1-204ENST00000535005 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 PSG3Q16557 428 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 ERASQ7Z444 233 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 TMEM61Q8N0U2 210 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 TP73-AS1Q9UF72 201 aa9.21□□□□□ -0.94
SCARB1-204ENST00000535005 SERTM2A0A1B0GWG4 89 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 ZNF785A8K8V0 405 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 IGLV2-11P01706 119 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 SAMD13Q5VXD3 122 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.2□□□□□ -0.94
SCARB1-204ENST00000535005 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 FBLL1A6NHQ2 334 aaKnown RBP9.19□□□□□ -0.94
SCARB1-204ENST00000535005 HBDP02042 147 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 FABP2P12104 132 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 HLA-DRB4P13762 266 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 RPL11P62913 178 aaKnown RBP9.19□□□□□ -0.94
SCARB1-204ENST00000535005 PDE6HQ13956 83 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 SPAG8Q99932 426 aaPredicted RBP9.19□□□□□ -0.94
SCARB1-204ENST00000535005 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 SELENOKQ9Y6D0 94 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 HLA-DRB4X5D2U9 266 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 CMYA5Q8N3K9 4069 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 SOCS3O14543 225 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 DNHD1Q96M86 4753 aa9.19□□□□□ -0.94
SCARB1-204ENST00000535005 H3BUT2 72 aa9.18□□□□□ -0.94
SCARB1-204ENST00000535005 K7EQG2 157 aa9.18□□□□□ -0.94
SCARB1-204ENST00000535005 SPCS1Q9Y6A9 102 aa9.18□□□□□ -0.94
SCARB1-204ENST00000535005 MGAM2Q2M2H8 2515 aa9.18□□□□□ -0.94
SCARB1-204ENST00000535005 ARMS2P0C7Q2 107 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 BEAN1Q3B7T3 259 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
SCARB1-204ENST00000535005 IGKV3-7A0A075B6H7 116 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 LINC01546A6NGU7 62 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 H0Y8G0 127 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 ZNF138P52744 262 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 GOLT1AQ6ZVE7 132 aa9.17□□□□□ -0.94
SCARB1-204ENST00000535005 A0A096LNJ9 63 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 TRAV8-2A0A0B4J237 113 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 H3BTX0 84 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 J3QR89 54 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 NCR2O95944 276 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
SCARB1-204ENST00000535005 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms