RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 C1QBP02746 253 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 GYPEP15421 78 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 CCL18P55774 89 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 FAM3BP58499 235 aaPredicted RBP3.44□□□□□ -1.86
USH1C-210ENST00000534556 KRTAP10-2P60368 255 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 RPL19P84098 196 aaKnown RBP3.44□□□□□ -1.86
USH1C-210ENST00000534556 ZNF674Q2M3X9 581 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 DNLZQ5SXM8 178 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 C1orf134Q5TEV5 83 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 DMRTA1Q5VZB9 504 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 CST9LP1Q5W188 147 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 LINC00336Q6ZUF6 198 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 Q8N3U1 123 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 C9orf62Q8N4C0 152 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 SLC25A29Q8N8R3 303 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 STOML3Q8TAV4 291 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 SFT2D1Q8WV19 159 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 SDF2L1Q9HCN8 221 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 BOLA1Q9Y3E2 137 aa3.44□□□□□ -1.86
USH1C-210ENST00000534556 TRBV20OR9-2A0A075B6H5 130 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 TMSB15BA0A087X1C1 80 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 TRGV4A0A0C4DH28 118 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 KANTRA0A1W2PQU2 76 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 RAB19A4D1S5 217 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 FABP5P3A8MUU1 101 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 H3BVH4 76 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 ARMS2P0C7Q2 107 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 LINC00694P0DN24 101 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 SULT1A2P50226 295 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 ZNF876PQ49A33 203 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 SAPCD1Q5SSQ6 148 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 C6orf223Q8N319 242 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 C14orf178Q8N769 122 aaPredicted RBP3.43□□□□□ -1.86
USH1C-210ENST00000534556 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 HIST1H2BAQ96A08 127 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 PTH2Q96A98 100 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 KCNS1Q96KK3 526 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 PARLQ9H300 379 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 SCRT2Q9NQ03 307 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 ICOSQ9Y6W8 199 aa3.43□□□□□ -1.86
USH1C-210ENST00000534556 TRAV1-1A0A0B4J248 108 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 MUC21A0A0G2JKD1 596 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 MUC21A0A140T8X8 626 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 B4DEV8 164 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 UMAD1C9J7I0 102 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 K7EQM0 130 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 SIVA1O15304 175 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 ORM1P02763 201 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 CRYGDP07320 174 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 H2AFB1P0C5Y9 115 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 TPT1P13693 172 aaKnown RBP3.42□□□□□ -1.86
USH1C-210ENST00000534556 AKR1C3P42330 323 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 NKX2-5P52952 324 aaPredicted RBP3.42□□□□□ -1.86
USH1C-210ENST00000534556 LINC00315P59091 139 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 MRPL23Q16540 153 aaKnown RBP3.42□□□□□ -1.86
USH1C-210ENST00000534556 NEGR1Q7Z3B1 354 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 C11orf52Q96A22 123 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 FMC1Q96HJ9 113 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 DNAJC30Q96LL9 226 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 NDFIP1Q9BT67 221 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 IL36BQ9NZH7 164 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 ZFP30Q9Y2G7 519 aa3.42□□□□□ -1.86
USH1C-210ENST00000534556 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 FBLL1A6NHQ2 334 aaKnown RBP3.41□□□□□ -1.86
USH1C-210ENST00000534556 PFDN1O60925 122 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 GZMBP10144 247 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 RPL35P42766 123 aaKnown RBP3.41□□□□□ -1.86
USH1C-210ENST00000534556 SLAQ13239 276 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 LINC01559Q495D7 138 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 OR10AG1Q8NH19 301 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 NKX6-2Q9C056 277 aaPredicted RBP3.41□□□□□ -1.86
USH1C-210ENST00000534556 GNG13Q9P2W3 67 aa3.41□□□□□ -1.86
USH1C-210ENST00000534556 A0A087WWL8 130 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 TRBV6-4A0A1B0GX49 114 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 RBFOX3A6NFN3 312 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 SNAI2O43623 268 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 SRIP30626 198 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 ASIPP42127 132 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 PPT1P50897 306 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 UBE2G1P62253 170 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 WFDC2Q14508 124 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 ZFP69Q49AA0 526 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 FAM162BQ5T6X4 162 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 ALKAL2Q6UX46 152 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 AKAP14Q86UN6 197 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 BAGE2Q86Y30 109 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 SFRP2Q96HF1 295 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 SSBP4Q9BWG4 385 aaPredicted RBP3.4□□□□□ -1.87
USH1C-210ENST00000534556 MSRB1Q9NZV6 116 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 KIF25-AS1Q9Y6Z4 181 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.87
USH1C-210ENST00000534556 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
USH1C-210ENST00000534556 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
USH1C-210ENST00000534556 GAGE12JA6NER3 117 aa3.39□□□□□ -1.87
USH1C-210ENST00000534556 K7EN84 100 aa3.39□□□□□ -1.87
USH1C-210ENST00000534556 M0R381 172 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms