RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 CLDN12P56749 244 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 PSME3P61289 254 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 RBX1P62877 108 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 GLYATQ6IB77 296 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 MRPL52Q86TS9 123 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 DHFR2Q86XF0 187 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 OR51A2Q8NGJ7 313 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 LINC00052Q96N35 136 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 OR2D2Q9H210 308 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 PRO0255Q9UI72 69 aa2.32□□□□□ -2.04
ECHDC1-223ENST00000534442 A0A0J9YX75 114 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 METTL15A6NJ78 407 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 A8MTW9 85 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 M0QXV9 152 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 M0R2Z0 102 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 COX7A2P2O60397 106 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 TNFAIP8O95379 198 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 CXorf1O96002 111 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 IGHV3-33P01772 117 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 OR13C7P0DN81 318 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 GNGT1P63211 74 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 PRCDQ00LT1 54 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 FLOT2Q14254 428 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 SPINK13Q1W4C9 94 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 SFXN4Q6P4A7 337 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 AMTNQ6UX39 209 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 DPPA3Q6W0C5 159 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 FA2HQ7L5A8 372 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 C9orf163Q8N9P6 203 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 OR51A4Q8NGJ6 313 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 Q8TAT8 98 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 TEX47Q8TBZ9 253 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 FXYD5Q96DB9 178 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 NKIRAS1Q9NYS0 192 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 DOK5Q9P104 306 aa2.31□□□□□ -2.04
ECHDC1-223ENST00000534442 PGPA6NDG6 321 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 K7EPK0 472 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 FXYD1O00168 92 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 PDCD6O75340 191 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 HRASP01112 189 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 KRASP01116 189 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 HMGN1P05114 100 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 PSMB3P49720 205 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 CRYBA4P53673 196 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 WT1-ASQ06250 92 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 RAB31Q13636 194 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 ZNF846Q147U1 533 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 TMEM241Q24JQ0 296 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 UBE2NLQ5JXB2 153 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 Q6ZTI0 123 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 BAP18Q8IXM2 172 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 TMEM203Q969S6 136 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 COMMD5Q9GZQ3 224 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 SLC25A31Q9H0C2 315 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 PLAC8Q9NZF1 115 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 HHLA3Q9XRX5 114 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 PRELID3BQ9Y3B1 194 aa2.3□□□□□ -2.04
ECHDC1-223ENST00000534442 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 TRAV1-1A0A0B4J248 108 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 H3BP45 60 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 SMLR1H3BR10 107 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 I3L2K1 104 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 SULT1C2O00338 296 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 MT2AP02795 61 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 IGLV7-43P04211 117 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 ZNF93P35789 620 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 HBG1P69891 147 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 HBG2P69892 147 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 PRR9Q5T870 116 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 ZNF738Q8NE65 137 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 PGLYRP3Q96LB9 341 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 YPEL4Q96NS1 127 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 TXNDC17Q9BRA2 123 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 BET1LQ9NYM9 111 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ECHDC1-223ENST00000534442 TMEM235A6NFC5 223 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 H7BYZ3 331 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 FABP7O15540 132 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 ORM1P02763 201 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 MT1FP04733 61 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 TRAPPC2P0DI81 140 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 TRAPPC2BP0DI82 140 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 RD3LP0DJH9 198 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 SERPINB10P48595 397 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 HLA-DRB3P79483 266 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 RPL19P84098 196 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 TMEM136Q6ZRR5 245 aa2.28□□□□□ -2.04
ECHDC1-223ENST00000534442 BOD1L2Q8IYS8 172 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms