RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
UBXN1-216ENST00000533908 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
UBXN1-216ENST00000533908 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
UBXN1-216ENST00000533908 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
UBXN1-216ENST00000533908 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
UBXN1-216ENST00000533908 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
UBXN1-216ENST00000533908 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
UBXN1-216ENST00000533908 MGST1P10620 155 aaKnown RBP11.89□□□□□ -0.51
UBXN1-216ENST00000533908 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
UBXN1-216ENST00000533908 NDFIP1Q9BT67 221 aa11.89□□□□□ -0.51
UBXN1-216ENST00000533908 PARLQ9H300 379 aa11.89□□□□□ -0.51
UBXN1-216ENST00000533908 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
UBXN1-216ENST00000533908 GAGE12JA6NER3 117 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 KRTAP29-1A8MX34 341 aaPredicted RBP11.88□□□□□ -0.51
UBXN1-216ENST00000533908 SSNA1O43805 119 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
UBXN1-216ENST00000533908 GAGE1Q13065 139 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 GAGE4Q13068 117 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 GAGE5Q13069 117 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 GAGE13Q4V321 117 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 DNAJC30Q96LL9 226 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 JPT2Q9H910 190 aa11.88□□□□□ -0.51
UBXN1-216ENST00000533908 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
UBXN1-216ENST00000533908 PET100P0DJ07 73 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 GCHFRP30047 84 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
UBXN1-216ENST00000533908 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 BAALCQ8WXS3 180 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 RAB24Q969Q5 203 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 SAMD10Q9BYL1 202 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
UBXN1-216ENST00000533908 GGTLC3B5MD39 225 aa11.86□□□□□ -0.51
UBXN1-216ENST00000533908 CDC34P49427 236 aaPredicted RBP11.86□□□□□ -0.51
UBXN1-216ENST00000533908 SMUG1Q53HV7 270 aa11.86□□□□□ -0.51
UBXN1-216ENST00000533908 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
UBXN1-216ENST00000533908 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
UBXN1-216ENST00000533908 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
UBXN1-216ENST00000533908 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
UBXN1-216ENST00000533908 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
UBXN1-216ENST00000533908 ZFP2Q6ZN57 461 aa11.85□□□□□ -0.51
UBXN1-216ENST00000533908 SCXQ7RTU7 201 aa11.84□□□□□ -0.51
UBXN1-216ENST00000533908 HSD17B11Q8NBQ5 300 aa11.84□□□□□ -0.51
UBXN1-216ENST00000533908 OR2G3Q8NGZ4 309 aa11.84□□□□□ -0.51
UBXN1-216ENST00000533908 LRP1Q07954 4544 aaKnown RBP11.84□□□□□ -0.51
UBXN1-216ENST00000533908 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
UBXN1-216ENST00000533908 A8MWV9 139 aa11.83□□□□□ -0.52
UBXN1-216ENST00000533908 K7EQM0 130 aa11.83□□□□□ -0.52
UBXN1-216ENST00000533908 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
UBXN1-216ENST00000533908 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.52
UBXN1-216ENST00000533908 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
UBXN1-216ENST00000533908 RNF222A6NCQ9 220 aa11.82□□□□□ -0.52
UBXN1-216ENST00000533908 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
UBXN1-216ENST00000533908 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
UBXN1-216ENST00000533908 CRIP1P50238 77 aa11.81□□□□□ -0.52
UBXN1-216ENST00000533908 ZFP69Q49AA0 526 aa11.81□□□□□ -0.52
UBXN1-216ENST00000533908 PIK3CD-AS1Q5SR53 167 aa11.81□□□□□ -0.52
UBXN1-216ENST00000533908 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
UBXN1-216ENST00000533908 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
UBXN1-216ENST00000533908 SH3BGRL3Q9H299 93 aa11.81□□□□□ -0.52
UBXN1-216ENST00000533908 NIT1Q86X76 327 aa11.8□□□□□ -0.52
UBXN1-216ENST00000533908 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
UBXN1-216ENST00000533908 A0A087WWC5 75 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 FABP5P3A8MUU1 101 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
UBXN1-216ENST00000533908 TOR2AQ5JU69 321 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 CHAC1Q9BUX1 264 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 TMEM167BQ9NRX6 74 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
UBXN1-216ENST00000533908 H3BVH4 76 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 CXorf1O96002 111 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 ASIPP42127 132 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 Q8N976 141 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 CIRBP-AS1Q8TBR5 109 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 COX11Q9Y6N1 276 aa11.78□□□□□ -0.52
UBXN1-216ENST00000533908 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-216ENST00000533908 SERF2P84101 59 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 ZNF726P1Q15940 193 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 Q5BKY6 102 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 AQP10Q96PS8 301 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 ACTR3CQ9C0K3 210 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-216ENST00000533908 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
UBXN1-216ENST00000533908 GRIFINA4D1Z8 144 aa11.76□□□□□ -0.53
UBXN1-216ENST00000533908 B4DEV8 164 aa11.76□□□□□ -0.53
UBXN1-216ENST00000533908 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
UBXN1-216ENST00000533908 MBP02144 154 aa11.76□□□□□ -0.53
UBXN1-216ENST00000533908 DNLZQ5SXM8 178 aa11.76□□□□□ -0.53
UBXN1-216ENST00000533908 HMCN2Q8NDA2 5059 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 A0A087WWL8 130 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 A6NHS1 94 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 M0R036 132 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
UBXN1-216ENST00000533908 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms