RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 ZFAND2AQ8N6M9 145 aa11.01□□□□□ -0.65
CHMP4A-207ENST00000533523 ZC2HC1AQ96GY0 325 aa11.01□□□□□ -0.65
CHMP4A-207ENST00000533523 J3KRW8 73 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 APOC3P02656 99 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 ATP5G1P05496 136 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 HTN1P15515 57 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 CCL18P55774 89 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 OR5I1Q13606 314 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 COX8CQ7Z4L0 72 aa11□□□□□ -0.65
CHMP4A-207ENST00000533523 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
CHMP4A-207ENST00000533523 GCGP01275 180 aa10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 PNRC1Q12796 327 aaPredicted RBP10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 PRR9Q5T870 116 aa10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 BIN3Q9NQY0 253 aa10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
CHMP4A-207ENST00000533523 PLAC8L1A1L4L8 177 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 C7orf71A4D174 169 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 KLLNB2CW77 178 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 M0R036 132 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 GPX1P07203 203 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 AZU1P20160 251 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 ZNF80P51504 273 aaPredicted RBP10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 KIR3DS1Q14943 382 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 SPATA12Q7Z6I5 190 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 ISOC2Q96AB3 205 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 TIMM8BQ9Y5J9 83 aaPredicted RBP10.98□□□□□ -0.65
CHMP4A-207ENST00000533523 TRAV12-3A0A0B4J271 114 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 S100A1P23297 94 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 RNASE4P34096 147 aaKnown RBP10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 CRIP1P50238 77 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 SVBPQ8N300 66 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
CHMP4A-207ENST00000533523 HMCN2Q8NDA2 5059 aa10.96□□□□□ -0.65
CHMP4A-207ENST00000533523 SH2D1AO60880 128 aa10.96□□□□□ -0.65
CHMP4A-207ENST00000533523 Q8N1X5 172 aa10.96□□□□□ -0.65
CHMP4A-207ENST00000533523 CBY3A6NI87 242 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 SNAPINO95295 136 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 SFRP2Q96HF1 295 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 LINC00467Q9BRT7 94 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 SCRT2Q9NQ03 307 aa10.95□□□□□ -0.66
CHMP4A-207ENST00000533523 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 FABP5P3A8MUU1 101 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 B4DEV8 164 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 PFN1P07737 140 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 ERVFC1-1P60608 527 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 Q6AWC8 147 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 Q6ZQT7 251 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 NUDT10Q8NFP7 164 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 DAZAP1Q96EP5 407 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 NUDT11Q96G61 164 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 NOP10Q9NPE3 64 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 SRRM2Q9UQ35 2752 aaKnown RBP10.94□□□□□ -0.66
CHMP4A-207ENST00000533523 P01737 135 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 MT-ND4LP03901 98 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 RHEBQ15382 184 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 IBA57Q5T440 356 aaKnown RBP10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 OR10G8Q8NGN5 311 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 KRTAP1-5Q9BYS1 174 aa10.93□□□□□ -0.66
CHMP4A-207ENST00000533523 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 ZNF324O75467 553 aaPredicted RBP10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 ANXA2RQ3ZCQ2 193 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 ATRAIDQ6UW56 229 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 Q9H8V8 135 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 C11orf21Q9P2W6 132 aa10.92□□□□□ -0.66
CHMP4A-207ENST00000533523 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 A0A0J9YY99 117 aa10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 RPS10P5Q9NQ39 176 aa10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 NAGKQ9UJ70 344 aa10.91□□□□□ -0.66
CHMP4A-207ENST00000533523 IGHV1OR15-1A0A075B7D0 117 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 PPP1R2P9O14990 202 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 ORM1P02763 201 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 MUC21Q5SSG8 566 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 LINC00612Q8N6U2 182 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 OR2D3Q8NGH3 330 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 V9GYV3 84 aa10.9□□□□□ -0.66
CHMP4A-207ENST00000533523 A0A087WWC5 75 aa10.89□□□□□ -0.67
CHMP4A-207ENST00000533523 TMSB15BA0A087X1C1 80 aa10.89□□□□□ -0.67
CHMP4A-207ENST00000533523 CTDSP1Q9GZU7 261 aa10.89□□□□□ -0.67
CHMP4A-207ENST00000533523 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
CHMP4A-207ENST00000533523 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
CHMP4A-207ENST00000533523 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 627.3 ms