RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PTH2Q96A98 100 aa10.48□□□□□ -0.73
CPSF1-211ENST00000533492 RYR1P21817 5038 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 TRAV8-6A0A0B4J262 113 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 MAP1LC3B2A6NCE7 125 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 FAM74A7A6NL05 159 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 G3V3Q6 166 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
CPSF1-211ENST00000533492 TIRAPP58753 221 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 STOML3Q8TAV4 291 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 MAP1LC3BQ9GZQ8 125 aa10.47□□□□□ -0.73
CPSF1-211ENST00000533492 IGKV3D-20A0A0C4DH25 116 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.73
CPSF1-211ENST00000533492 ASIPP42127 132 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 LGALSLQ3ZCW2 172 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-211ENST00000533492 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 KRTAP4-5Q9BYR2 181 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
CPSF1-211ENST00000533492 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 A8MWV9 139 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 B4DEV8 164 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 UBE2G1P62253 170 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 Q86TA4 180 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 ZFP30Q9Y2G7 519 aa10.45□□□□□ -0.74
CPSF1-211ENST00000533492 A0A087WTM6 91 aa10.44□□□□□ -0.74
CPSF1-211ENST00000533492 SMLR1H3BR10 107 aa10.44□□□□□ -0.74
CPSF1-211ENST00000533492 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
CPSF1-211ENST00000533492 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
CPSF1-211ENST00000533492 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
CPSF1-211ENST00000533492 M0R036 132 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPSF1-211ENST00000533492 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 PIK3CD-AS1Q5SR53 167 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 ZFP2Q6ZN57 461 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 FMC1Q96HJ9 113 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 PARLQ9H300 379 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
CPSF1-211ENST00000533492 H3BVH4 76 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 PSCAO43653 123 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 FHITP49789 147 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 FAM162BQ5T6X4 162 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 LELP1Q5T871 98 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 Q8N1X5 172 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 KCNRGQ8N5I3 272 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 ZC2HC1AQ96GY0 325 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 TCEAL7Q9BRU2 100 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 HSPG2P98160 4391 aa10.42□□□□□ -0.74
CPSF1-211ENST00000533492 KRBOX1C9JBD0 128 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 SH2D1AO60880 128 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 CRIP1P50238 77 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 ZNF345Q14585 488 aa10.41□□□□□ -0.74
CPSF1-211ENST00000533492 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 IBA57-AS1B1ANH7 110 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 PAGE4O60829 102 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 AKR1C3P42330 323 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 GAGE1Q13065 139 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 GAGE4Q13068 117 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 GAGE5Q13069 117 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 GAGE13Q4V321 117 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 Q6ZSN1 163 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 COX8CQ7Z4L0 72 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 SFT2D1Q8WV19 159 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 JPT2Q9H910 190 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
CPSF1-211ENST00000533492 A0A0D9SG52 128 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 FAM213BQ8TBF2 198 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 ZNF471Q9BX82 626 aaPredicted RBP10.39□□□□□ -0.75
CPSF1-211ENST00000533492 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 Q9HAA7 133 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 DNAH5Q8TE73 4624 aa10.39□□□□□ -0.75
CPSF1-211ENST00000533492 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 A0A1B0GV50 99 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 RHODO00212 210 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 LTAP01374 205 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
CPSF1-211ENST00000533492 ZNF674Q2M3X9 581 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
CPSF1-211ENST00000533492 M0R381 172 aa10.37□□□□□ -0.75
CPSF1-211ENST00000533492 S100A9P06702 114 aaKnown RBP10.37□□□□□ -0.75
CPSF1-211ENST00000533492 EIF5AP63241 154 aaKnown RBP10.37□□□□□ -0.75
CPSF1-211ENST00000533492 LINC01559Q495D7 138 aa10.37□□□□□ -0.75
CPSF1-211ENST00000533492 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms