RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ARMS2P0C7Q2 107 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
SSBP3-214ENST00000533209 RPL19P84098 196 aaKnown RBP8.38□□□□□ -1.07
SSBP3-214ENST00000533209 FHL2Q14192 279 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 ZNF876PQ49A33 203 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 ZNF479Q96JC4 524 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 SCRT2Q9NQ03 307 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 MUC4Q99102 2169 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 A0A0J9YY99 117 aa8.37□□□□□ -1.07
SSBP3-214ENST00000533209 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
SSBP3-214ENST00000533209 SRP19P09132 144 aaKnown RBP8.37□□□□□ -1.07
SSBP3-214ENST00000533209 CXCL1P09341 107 aa8.37□□□□□ -1.07
SSBP3-214ENST00000533209 OCC1Q8TAD7 63 aa8.37□□□□□ -1.07
SSBP3-214ENST00000533209 H3BNG1 76 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 K7EN84 100 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 RS1O15537 224 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 NUDT3O95989 172 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 CEBPGP53567 150 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 IFITM2Q01629 132 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 CFAP126Q5VTH2 177 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 OR4C5Q8NGB2 326 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 BIN3Q9NQY0 253 aa8.36□□□□□ -1.07
SSBP3-214ENST00000533209 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 C9JQL5 133 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 P0DMU3 169 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 CRYBA4P53673 196 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 SRSF3P84103 164 aaKnown RBP8.35□□□□□ -1.07
SSBP3-214ENST00000533209 DAZAP1Q96EP5 407 aaKnown RBP8.35□□□□□ -1.07
SSBP3-214ENST00000533209 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 HHLA3Q9XRX5 114 aa8.35□□□□□ -1.07
SSBP3-214ENST00000533209 PAX4O43316 350 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 SNAI2O43623 268 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 P01737 135 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 SLAQ13239 276 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 NUDT10Q8NFP7 164 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 OR2D3Q8NGH3 330 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-214ENST00000533209 JPT2Q9H910 190 aa8.34□□□□□ -1.07
SSBP3-214ENST00000533209 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 A0A096LPF7 62 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 OR5AL1P0C617 328 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-214ENST00000533209 PEA15Q15121 130 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 SYT8Q8NBV8 401 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 LY96Q9Y6Y9 160 aa8.33□□□□□ -1.08
SSBP3-214ENST00000533209 ZNF727A8MUV8 499 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 A8MWV9 139 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 M0R381 172 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 CIDEAO60543 219 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 NXPH4O95158 308 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 IGLC6P0CF74 106 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 GZMBP10144 247 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
SSBP3-214ENST00000533209 RAB14P61106 215 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 RNF212Q495C1 297 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 UFSP1Q6NVU6 142 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 ZFP82Q8N141 532 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 OR10AG1Q8NH19 301 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 RNASE7Q9H1E1 156 aaKnown RBP8.32□□□□□ -1.08
SSBP3-214ENST00000533209 SMDT1Q9H4I9 107 aa8.32□□□□□ -1.08
SSBP3-214ENST00000533209 IGHV3-73A0A0B4J1V6 119 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 MUC21A0A0G2JKD1 596 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 MUC21A0A140T8X8 626 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 CLLU1Q5K131 121 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 ZFP2Q6ZN57 461 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 LINC01551Q86U37 167 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
SSBP3-214ENST00000533209 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
SSBP3-214ENST00000533209 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 GYPEP15421 78 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 FAM74A3Q4VXF1 159 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 Q6ZSN1 163 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 FAM231DQ6ZW35 169 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 UBE2DNLQ8IWF7 75 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
SSBP3-214ENST00000533209 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 TRBV6-4A0A1B0GX49 114 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 K7EQD1 137 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 CRYGDP07320 174 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 CCL18P55774 89 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
SSBP3-214ENST00000533209 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
SSBP3-214ENST00000533209 ESRGQ1W209 222 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 SPANXN1Q5VSR9 72 aa8.29□□□□□ -1.08
SSBP3-214ENST00000533209 A0A087WWL8 130 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms