RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ZNF876PQ49A33 203 aa17.4■□□□□ 0.38
USP48-214ENST00000532737 PTH2Q96A98 100 aa17.4■□□□□ 0.38
USP48-214ENST00000532737 IL36BQ9NZH7 164 aa17.4■□□□□ 0.38
USP48-214ENST00000532737 C19orf71A6NCJ1 209 aa17.39■□□□□ 0.37
USP48-214ENST00000532737 C9JQL5 133 aa17.39■□□□□ 0.37
USP48-214ENST00000532737 RAB14P61106 215 aa17.39■□□□□ 0.37
USP48-214ENST00000532737 MUC4Q99102 2169 aa17.39■□□□□ 0.37
USP48-214ENST00000532737 LINC00476Q8WZB0 136 aa17.38■□□□□ 0.37
USP48-214ENST00000532737 ZNF479Q96JC4 524 aa17.38■□□□□ 0.37
USP48-214ENST00000532737 ALMS1Q8TCU4 4167 aa17.38■□□□□ 0.37
USP48-214ENST00000532737 TRAV26-1A0A087WT03 109 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 K7EN84 100 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 SFTA3P0C7M3 94 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 FHL2Q14192 279 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 DAZAP1Q96EP5 407 aaKnown RBP17.37■□□□□ 0.37
USP48-214ENST00000532737 SCRT2Q9NQ03 307 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 BIN3Q9NQY0 253 aa17.37■□□□□ 0.37
USP48-214ENST00000532737 TRAV4A0A0B4J268 109 aa17.36■□□□□ 0.37
USP48-214ENST00000532737 CXCL1P09341 107 aa17.36■□□□□ 0.37
USP48-214ENST00000532737 PEA15Q15121 130 aa17.36■□□□□ 0.37
USP48-214ENST00000532737 SMIM7Q9BQ49 75 aa17.36■□□□□ 0.37
USP48-214ENST00000532737 A0A0J9YY99 117 aa17.35■□□□□ 0.37
USP48-214ENST00000532737 OR4C5Q8NGB2 326 aa17.35■□□□□ 0.37
USP48-214ENST00000532737 ZNF727A8MUV8 499 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 RS1O15537 224 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 LY6G6CO95867 125 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 CLLU1Q5K131 121 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 C15orf53Q8NAA6 179 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 NUDT10Q8NFP7 164 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 OR2D3Q8NGH3 330 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 NUDT11Q96G61 164 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 VSIG2Q96IQ7 327 aa17.34■□□□□ 0.37
USP48-214ENST00000532737 P01737 135 aa17.33■□□□□ 0.36
USP48-214ENST00000532737 CFAP126Q5VTH2 177 aa17.33■□□□□ 0.36
USP48-214ENST00000532737 DMRTA1Q5VZB9 504 aa17.33■□□□□ 0.36
USP48-214ENST00000532737 LGALS9CQ6DKI2 356 aa17.33■□□□□ 0.36
USP48-214ENST00000532737 TRGV4A0A0C4DH28 118 aa17.32■□□□□ 0.36
USP48-214ENST00000532737 MED14OSP0DP75 135 aa17.32■□□□□ 0.36
USP48-214ENST00000532737 SMDT1Q9H4I9 107 aa17.32■□□□□ 0.36
USP48-214ENST00000532737 PHLDA3Q9Y5J5 127 aa17.32■□□□□ 0.36
USP48-214ENST00000532737 NUDT3O95989 172 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 GZMBP10144 247 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 PIK3CD-AS1Q5SR53 167 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 SSBP4Q9BWG4 385 aaPredicted RBP17.31■□□□□ 0.36
USP48-214ENST00000532737 RNASE7Q9H1E1 156 aaKnown RBP17.31■□□□□ 0.36
USP48-214ENST00000532737 PRO0255Q9UI72 69 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 HHLA3Q9XRX5 114 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 LY96Q9Y6Y9 160 aa17.31■□□□□ 0.36
USP48-214ENST00000532737 H3BNG1 76 aa17.3■□□□□ 0.36
USP48-214ENST00000532737 CRYBA4P53673 196 aa17.3■□□□□ 0.36
USP48-214ENST00000532737 RPS20P60866 119 aaKnown RBP17.3■□□□□ 0.36
USP48-214ENST00000532737 SYT8Q8NBV8 401 aa17.3■□□□□ 0.36
USP48-214ENST00000532737 JPT2Q9H910 190 aa17.3■□□□□ 0.36
USP48-214ENST00000532737 VPS13DQ5THJ4 4388 aa17.3■□□□□ 0.36
USP48-214ENST00000532737 M0R381 172 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 PAX4O43316 350 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 SNAI2O43623 268 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 SLAQ13239 276 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 LINC01551Q86U37 167 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 OR10AG1Q8NH19 301 aa17.29■□□□□ 0.36
USP48-214ENST00000532737 OR5AL1P0C617 328 aa17.28■□□□□ 0.36
USP48-214ENST00000532737 FAM74A3Q4VXF1 159 aa17.28■□□□□ 0.36
USP48-214ENST00000532737 IGHV3-73A0A0B4J1V6 119 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 MUC21A0A0G2JKD1 596 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 MUC21A0A140T8X8 626 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 A8MWV9 139 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 IGLC6P0CF74 106 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 ZFP82Q8N141 532 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 SAMD10Q9BYL1 202 aa17.27■□□□□ 0.36
USP48-214ENST00000532737 P0DMU3 169 aa17.26■□□□□ 0.35
USP48-214ENST00000532737 FAM231AP0DMU4 169 aa17.26■□□□□ 0.35
USP48-214ENST00000532737 FAM231CP0DMU5 169 aa17.26■□□□□ 0.35
USP48-214ENST00000532737 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
USP48-214ENST00000532737 TMEM241Q24JQ0 296 aa17.26■□□□□ 0.35
USP48-214ENST00000532737 RPP21Q9H633 154 aaKnown RBP17.26■□□□□ 0.35
USP48-214ENST00000532737 NACAE9PAV3 2078 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 XKRY2A2RUG3 117 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 CIDEAO60543 219 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 NXPH4O95158 308 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 FAM231DQ6ZW35 169 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 FER1L6-AS1Q8NA97 138 aa17.25■□□□□ 0.35
USP48-214ENST00000532737 A0A096LPF7 62 aa17.24■□□□□ 0.35
USP48-214ENST00000532737 SOHLH1Q5JUK2 328 aa17.24■□□□□ 0.35
USP48-214ENST00000532737 SFRP2Q96HF1 295 aa17.24■□□□□ 0.35
USP48-214ENST00000532737 TPPP3Q9BW30 176 aa17.24■□□□□ 0.35
USP48-214ENST00000532737 GATCO43716 136 aaKnown RBP17.23■□□□□ 0.35
USP48-214ENST00000532737 ERVFC1-1P60608 527 aa17.23■□□□□ 0.35
USP48-214ENST00000532737 SSTP61278 116 aa17.23■□□□□ 0.35
USP48-214ENST00000532737 UFSP1Q6NVU6 142 aa17.23■□□□□ 0.35
USP48-214ENST00000532737 ZFP2Q6ZN57 461 aa17.23■□□□□ 0.35
USP48-214ENST00000532737 RPL23P62829 140 aaKnown RBP17.22■□□□□ 0.35
USP48-214ENST00000532737 SPANXN1Q5VSR9 72 aa17.22■□□□□ 0.35
USP48-214ENST00000532737 Q6ZSN1 163 aa17.22■□□□□ 0.35
USP48-214ENST00000532737 NAT8Q9UHE5 227 aa17.22■□□□□ 0.35
USP48-214ENST00000532737 A0A087WWL8 130 aa17.21■□□□□ 0.35
USP48-214ENST00000532737 CRYGDP07320 174 aa17.21■□□□□ 0.35
USP48-214ENST00000532737 SLC25A29Q8N8R3 303 aa17.21■□□□□ 0.35
USP48-214ENST00000532737 ICOSQ9Y6W8 199 aa17.21■□□□□ 0.35
USP48-214ENST00000532737 LOC100131303A0A0U1RQF7 123 aa17.2■□□□□ 0.34
USP48-214ENST00000532737 GYPEP15421 78 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms