RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	GRIFIN	A4D1Z8	144 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	RTL8C	O15255	209 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	S100A4	P26447	101 aa	Known RBP	12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	ASIP	P42127	132 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	BLOC1S1	P78537	153 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	ZNF506	Q5JVG8	444 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	CFAP126	Q5VTH2	177 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	BAGE2	Q86Y30	109 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	DERL1	Q9BUN8	251 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	ICOS	Q9Y6W8	199 aa		12.02	□□□□□ -0.49
CTSB-223	ENST00000532370	TMSB15B	A0A087X1C1	80 aa		12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	IGHV3-73	A0A0B4J1V6	119 aa		12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	S100A9	P06702	114 aa	Known RBP	12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	RPL35	P42766	123 aa	Known RBP	12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	MLST8	Q9BVC4	326 aa		12.01	□□□□□ -0.49
CTSB-223	ENST00000532370		Q9H8V8	135 aa		12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	NACA	E9PAV3	2078 aa		12.01	□□□□□ -0.49
CTSB-223	ENST00000532370	PKHD1	P08F94	4074 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	LOC100131303	A0A0U1RQF7	123 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	NBDY	A0A0U1RRE5	68 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370		H3BVH4	76 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370		K7EQD1	137 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	RS1	O15537	224 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	GYPE	P15421	78 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	PTH2	Q96A98	100 aa		12	□□□□□ -0.49
CTSB-223	ENST00000532370	MRPS16	Q9Y3D3	137 aa	Known RBP	12	□□□□□ -0.49
CTSB-223	ENST00000532370	ARMS2	P0C7Q2	107 aa		11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	GATA1	P15976	413 aa	Predicted RBP	11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	MRPL23	Q16540	153 aa	Known RBP	11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	LINC01559	Q495D7	138 aa		11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	C11orf52	Q96A22	123 aa		11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	UPK3B	Q9BT76	320 aa		11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	IL36B	Q9NZH7	164 aa		11.99	□□□□□ -0.49
CTSB-223	ENST00000532370	RPL19	P84098	196 aa	Known RBP	11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	DMRTA1	Q5VZB9	504 aa		11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	LYPD5	Q6UWN5	251 aa		11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	TXNDC17	Q9BRA2	123 aa		11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	JPT2	Q9H910	190 aa		11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	DNAH11	Q96DT5	4516 aa		11.98	□□□□□ -0.49
CTSB-223	ENST00000532370	PKD1	P98161	4303 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	RAB19	A4D1S5	217 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	BCL2	P10415	239 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	MEF2B	Q02080	365 aa	Predicted RBP	11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	DNLZ	Q5SXM8	178 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	C1orf134	Q5TEV5	83 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	NEGR1	Q7Z3B1	354 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	SLC25A29	Q8N8R3	303 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	KRTAP1-5	Q9BYS1	174 aa		11.97	□□□□□ -0.49
CTSB-223	ENST00000532370	IFNA1	P01562	189 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	SRI	P30626	198 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	TAGLN2	P37802	199 aa	Known RBP	11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	PRR27	Q6MZM9	219 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370		Q6ZSN1	163 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	PCNP	Q8WW12	178 aa	Known RBP	11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	SAMD10	Q9BYL1	202 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	SCRT2	Q9NQ03	307 aa		11.96	□□□□□ -0.49
CTSB-223	ENST00000532370	DYNC1H1	Q14204	4646 aa	Known RBP	11.96	□□□□□ -0.5
CTSB-223	ENST00000532370	CENPW	Q5EE01	88 aa		11.95	□□□□□ -0.5
CTSB-223	ENST00000532370	LINC00336	Q6ZUF6	198 aa		11.95	□□□□□ -0.5
CTSB-223	ENST00000532370	PARL	Q9H300	379 aa		11.95	□□□□□ -0.5
CTSB-223	ENST00000532370	VAX2	Q9UIW0	290 aa		11.95	□□□□□ -0.5
CTSB-223	ENST00000532370	PRSS29P	A6NIE9	313 aa		11.94	□□□□□ -0.5
CTSB-223	ENST00000532370	PDE6D	O43924	150 aa		11.94	□□□□□ -0.5
CTSB-223	ENST00000532370	NXPH4	O95158	308 aa		11.94	□□□□□ -0.5
CTSB-223	ENST00000532370	IGLV2-8	P01709	118 aa		11.94	□□□□□ -0.5
CTSB-223	ENST00000532370	MED9	Q9NWA0	146 aa		11.94	□□□□□ -0.5
CTSB-223	ENST00000532370		A8MWV9	139 aa		11.93	□□□□□ -0.5
CTSB-223	ENST00000532370	PIK3CD-AS1	Q5SR53	167 aa		11.93	□□□□□ -0.5
CTSB-223	ENST00000532370	UFSP1	Q6NVU6	142 aa		11.93	□□□□□ -0.5
CTSB-223	ENST00000532370	PHLDA3	Q9Y5J5	127 aa		11.93	□□□□□ -0.5
CTSB-223	ENST00000532370	TRBV20OR9-2	A0A075B6H5	130 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370		A0A1B0GVY2	172 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	TRBV6-4	A0A1B0GX49	114 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370		M0R381	172 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	CIDEA	O60543	219 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	MGST1	P10620	155 aa	Known RBP	11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	IFITM2	Q01629	132 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	C6orf223	Q8N319	242 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370	SYT8	Q8NBV8	401 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370		Q9UF83	564 aa		11.92	□□□□□ -0.5
CTSB-223	ENST00000532370		A0A087WWL8	130 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	MUC21	A0A0G2JKD1	596 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	MUC21	A0A140T8X8	626 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	GNG4	P50150	75 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	SOHLH1	Q5JUK2	328 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	ZFP2	Q6ZN57	461 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	PRADC1	Q9BSG0	188 aa		11.91	□□□□□ -0.5
CTSB-223	ENST00000532370	RBFOX3	A6NFN3	312 aa		11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	SIVA1	O15304	175 aa		11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	NDUFS6	O75380	124 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	RHOH	Q15669	191 aa		11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	OR10AG1	Q8NH19	301 aa		11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	SFRP2	Q96HF1	295 aa		11.9	□□□□□ -0.5
CTSB-223	ENST00000532370	TTC32	Q5I0X7	151 aa		11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	FAM74A4	Q5TZK3	123 aa		11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	WFDC10B	Q8IUB3	73 aa		11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	ZFP82	Q8N141	532 aa		11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	C14orf178	Q8N769	122 aa	Predicted RBP	11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	FAM210A	Q96ND0	272 aa		11.89	□□□□□ -0.51
CTSB-223	ENST00000532370	CRYGD	P07320	174 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms