RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
USF1-210ENST00000531842 GOLT1AQ6ZVE7 132 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 DNAJC30Q96LL9 226 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 SDF2L1Q9HCN8 221 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 TREM1Q9NP99 234 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 TNXBP22105 4242 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-38A0A0C4DH36 116 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 F6UZH7 168 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 OXTP01178 125 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 IGLV2-11P01706 119 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.46
USF1-210ENST00000531842 GCHFRP30047 84 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 CDC34P49427 236 aaPredicted RBP5.9□□□□□ -1.46
USF1-210ENST00000531842 GNG5P63218 68 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 OR10J3Q5JRS4 329 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 PQLC2Q6ZP29 291 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 TMED6Q8WW62 240 aa5.9□□□□□ -1.46
USF1-210ENST00000531842 FBLL1A6NHQ2 334 aaKnown RBP5.89□□□□□ -1.47
USF1-210ENST00000531842 GGTLC3B5MD39 225 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 ARPC5O15511 151 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 SERF2P84101 59 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 BAALCQ8WXS3 180 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 KCNS1Q96KK3 526 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 SGK494Q96LW2 274 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 PRADC1Q9BSG0 188 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 NDFIP1Q9BT67 221 aa5.89□□□□□ -1.47
USF1-210ENST00000531842 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 C1QBP02746 253 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 TYMSP04818 313 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 FHITP49789 147 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 ZNF80P51504 273 aaPredicted RBP5.88□□□□□ -1.47
USF1-210ENST00000531842 TIRAPP58753 221 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 ZNF876PQ49A33 203 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 LINC01556Q5JQF7 62 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 SLC25A29Q8N8R3 303 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 INO80EQ8NBZ0 244 aaPredicted RBP5.88□□□□□ -1.47
USF1-210ENST00000531842 DAZAP1Q96EP5 407 aaKnown RBP5.88□□□□□ -1.47
USF1-210ENST00000531842 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
USF1-210ENST00000531842 K7EQM0 130 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 TCRAP04437 139 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
USF1-210ENST00000531842 KCNRGQ8N5I3 272 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 ARL6IP6Q8N6S5 226 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 BOLA1Q9Y3E2 137 aa5.87□□□□□ -1.47
USF1-210ENST00000531842 TAAR5O14804 337 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 ASIPP42127 132 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 FGF8P55075 233 aaPredicted RBP5.86□□□□□ -1.47
USF1-210ENST00000531842 SUMO1P63165 101 aaKnown RBP5.86□□□□□ -1.47
USF1-210ENST00000531842 RHOHQ15669 191 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 ZFP69Q49AA0 526 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 CFAP126Q5VTH2 177 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 DAZ4Q86SG3 579 aaKnown RBP5.86□□□□□ -1.47
USF1-210ENST00000531842 ACTR3CQ9C0K3 210 aaPredicted RBP5.86□□□□□ -1.47
USF1-210ENST00000531842 DAZ3Q9NR90 486 aaKnown RBP5.86□□□□□ -1.47
USF1-210ENST00000531842 EPDR1Q9UM22 224 aa5.86□□□□□ -1.47
USF1-210ENST00000531842 BORCS7-ASMTA0A0B4J1R7 106 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 CTXND1A0A1B0GTU2 59 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 SERTM2A0A1B0GWG4 89 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 TRBV6-4A0A1B0GX49 114 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 HMSDA8MTL9 139 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 RS1O15537 224 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 CIDEAO60543 219 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 CXorf1O96002 111 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 GCGP01275 180 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 MBP02144 154 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 ZNF345Q14585 488 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 LELP1Q5T871 98 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 Q6ZNX1 250 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 C5orf17Q8NAS9 161 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 ATP6V0E2Q8NHE4 81 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 TM2D2Q9BX73 214 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 GTSF1LQ9H1H1 148 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 Q9UF83 564 aa5.85□□□□□ -1.47
USF1-210ENST00000531842 TRAV34A0A0B4J273 112 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 A0A1W2PRE2 83 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 RBFOX3A6NFN3 312 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 FAM74A7A6NL05 159 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 MGST1P10620 155 aaKnown RBP5.84□□□□□ -1.47
USF1-210ENST00000531842 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
USF1-210ENST00000531842 CRIP1P50238 77 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 UBE2G2P60604 165 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 RPL37AP61513 92 aaKnown RBP5.84□□□□□ -1.47
USF1-210ENST00000531842 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 PRNTQ86SH4 94 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 PSG8Q9UQ74 426 aa5.84□□□□□ -1.47
USF1-210ENST00000531842 GAGE12JA6NER3 117 aa5.83□□□□□ -1.48
USF1-210ENST00000531842 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
USF1-210ENST00000531842 BCL2L11O43521 198 aa5.83□□□□□ -1.48
USF1-210ENST00000531842 FLI1Q01543 452 aaPredicted RBP5.83□□□□□ -1.48
USF1-210ENST00000531842 GAGE1Q13065 139 aa5.83□□□□□ -1.48
USF1-210ENST00000531842 GAGE4Q13068 117 aa5.83□□□□□ -1.48
USF1-210ENST00000531842 GAGE5Q13069 117 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms