RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 HLA-DRB4X5D2U9 266 aa6.5□□□□□ -1.37
CHMP4A-205ENST00000531158 GRIFINA4D1Z8 144 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 BUB3O43684 328 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 SERF1AO75920 110 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 TCRAP04437 139 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 PSG1P11464 419 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 LYZP61626 148 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 Q86TA4 180 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 MRPL52Q86TS9 123 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 UBE2DNLQ8IWF7 75 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 SHANK2-AS3Q9BTD1 123 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 C1QTNF4Q9BXJ3 329 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 SLC25A39Q9BZJ4 359 aaPredicted RBP6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 GFRA4Q9GZZ7 299 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 Q9H3A6 140 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 NRN1Q9NPD7 142 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 NAGKQ9UJ70 344 aa6.49□□□□□ -1.37
CHMP4A-205ENST00000531158 SERTM2A0A1B0GWG4 89 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 A0A1B0GXF2 115 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 C19orf71A6NCJ1 209 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 PGPA6NDG6 321 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 NPIPB6E9PJ23 425 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 SOCS3O14543 225 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 IL4P05112 153 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 RD3LP0DJH9 198 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 INAFM2P0DMQ5 153 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 GNG5P63218 68 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 PDE6HQ13956 83 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 FAM162BQ5T6X4 162 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 DMRTA1Q5VZB9 504 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 SIGLEC15Q6ZMC9 328 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 BAGE3Q86Y29 109 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 BPIFA4PQ86YQ2 179 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 ARL6IP6Q8N6S5 226 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 TMEM75Q8N9X5 138 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 ZNF586Q9NXT0 402 aa6.48□□□□□ -1.37
CHMP4A-205ENST00000531158 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 SMIM9A6NGZ8 99 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 A8MWL6 223 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 F6UB75 175 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 NUPR1O60356 82 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 APCSP02743 223 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 S100A7P31151 101 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 TCL1AP56279 114 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 NUTF2P61970 127 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 C1orf194Q5T5A4 169 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 MRPL54Q6P161 138 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 TEX43Q6ZNM6 134 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 BLNKQ8WV28 456 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 RNF125Q96EQ8 232 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 LINC00479Q96M42 142 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 SAMD10Q9BYL1 202 aa6.47□□□□□ -1.37
CHMP4A-205ENST00000531158 TRBV19A0A075B6N1 114 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 TRAV34A0A0B4J273 112 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 K7EQM0 130 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 SCGB1D1O95968 90 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 P01737 135 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 PRM2P04554 102 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 IGLC2P0DOY2 106 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 HTN3P15516 51 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 SRIP30626 198 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 SNRPD3P62318 126 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 HBBP68871 147 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 FAT1Q14517 4588 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 NHLRC2Q8NBF2 726 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 ZNRF2Q8NHG8 242 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 C20orf144Q9BQM9 153 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 PRO1933Q9H354 126 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
CHMP4A-205ENST00000531158 TMEM189A5PLL7 270 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 HIGD1CA8MV81 97 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 ZNF253O75346 499 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 ZNF324O75467 553 aaPredicted RBP6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 GPX1P07203 203 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 RAB4AP20338 218 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 SLAQ13239 276 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 Q6AWC8 147 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 PRR27Q6MZM9 219 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 AMTNQ6UX39 209 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 FOXI2Q6ZQN5 318 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 GATD1Q8NB37 220 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 C18orf32Q8TCD1 76 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 CLUHP3Q96NS8 147 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
CHMP4A-205ENST00000531158 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms