RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
UBXN1-211ENST00000531056 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
UBXN1-211ENST00000531056 LTAP01374 205 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 CRIP1P50238 77 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 UBE2G1P62253 170 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 MRPL23Q16540 153 aaKnown RBP13.06□□□□□ -0.32
UBXN1-211ENST00000531056 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 PTH2Q96A98 100 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
UBXN1-211ENST00000531056 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 C9JCJ5 164 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 K7EQD1 137 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 ZNF876PQ49A33 203 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 C6orf223Q8N319 242 aa13.05□□□□□ -0.32
UBXN1-211ENST00000531056 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 RS1O15537 224 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 PDE6DO43924 150 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 SH2D1AO60880 128 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 ORM1P02763 201 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
UBXN1-211ENST00000531056 GYPEP15421 78 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 GATA1P15976 413 aaPredicted RBP13.04□□□□□ -0.32
UBXN1-211ENST00000531056 RAB14P61106 215 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
UBXN1-211ENST00000531056 PCNPQ8WW12 178 aaKnown RBP13.04□□□□□ -0.32
UBXN1-211ENST00000531056 RBFOX3A6NFN3 312 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 NEGR1Q7Z3B1 354 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
UBXN1-211ENST00000531056 PKD1P98161 4303 aa13.02□□□□□ -0.32
UBXN1-211ENST00000531056 A0A1W2PPQ1 181 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 B4DEV8 164 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 KRBOX1C9JBD0 128 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 SRIP30626 198 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 ASIPP42127 132 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 DNLZQ5SXM8 178 aa13.02□□□□□ -0.33
UBXN1-211ENST00000531056 LOC100131303A0A0U1RQF7 123 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 CIDEAO60543 219 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 NXPH4O95158 308 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 ZNF575Q86XF7 245 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 FAM210AQ96ND0 272 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
UBXN1-211ENST00000531056 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
UBXN1-211ENST00000531056 SIVA1O15304 175 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 S100A4P26447 101 aaKnown RBP13□□□□□ -0.33
UBXN1-211ENST00000531056 IFITM2Q01629 132 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 LINC01559Q495D7 138 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 TOR2AQ5JU69 321 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 PIK3CD-AS1Q5SR53 167 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 PKHD1P08F94 4074 aa13□□□□□ -0.33
UBXN1-211ENST00000531056 H3BVH4 76 aa12.99□□□□□ -0.33
UBXN1-211ENST00000531056 M0R036 132 aa12.99□□□□□ -0.33
UBXN1-211ENST00000531056 SLC25A29Q8N8R3 303 aa12.99□□□□□ -0.33
UBXN1-211ENST00000531056 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
UBXN1-211ENST00000531056 MED9Q9NWA0 146 aa12.99□□□□□ -0.33
UBXN1-211ENST00000531056 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
UBXN1-211ENST00000531056 TNP2Q05952 138 aa12.98□□□□□ -0.33
UBXN1-211ENST00000531056 MLST8Q9BVC4 326 aa12.98□□□□□ -0.33
UBXN1-211ENST00000531056 PARLQ9H300 379 aa12.98□□□□□ -0.33
UBXN1-211ENST00000531056 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
UBXN1-211ENST00000531056 TRBV6-4A0A1B0GX49 114 aa12.97□□□□□ -0.33
UBXN1-211ENST00000531056 TMEM250H0YL14 139 aa12.97□□□□□ -0.33
UBXN1-211ENST00000531056 NDUFS6O75380 124 aaKnown RBP12.97□□□□□ -0.33
UBXN1-211ENST00000531056 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 A8MWV9 139 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
UBXN1-211ENST00000531056 RHOHQ15669 191 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 SH2D6Q7Z4S9 175 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 DERL1Q9BUN8 251 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 SCRT2Q9NQ03 307 aa12.96□□□□□ -0.33
UBXN1-211ENST00000531056 MGST1P10620 155 aaKnown RBP12.95□□□□□ -0.34
UBXN1-211ENST00000531056 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
UBXN1-211ENST00000531056 ZFP2Q6ZN57 461 aa12.95□□□□□ -0.34
UBXN1-211ENST00000531056 PRADC1Q9BSG0 188 aa12.95□□□□□ -0.34
UBXN1-211ENST00000531056 JPT2Q9H910 190 aa12.95□□□□□ -0.34
UBXN1-211ENST00000531056 TMSB15BA0A087X1C1 80 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 TIRAPP58753 221 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 PEA15Q15121 130 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 Q6ZSN1 163 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 WFDC10BQ8IUB3 73 aa12.94□□□□□ -0.34
UBXN1-211ENST00000531056 GNG4P50150 75 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 LINC00315P59091 139 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 SMIM12Q96EX1 92 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 SAMD10Q9BYL1 202 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 SMDT1Q9H4I9 107 aa12.93□□□□□ -0.34
UBXN1-211ENST00000531056 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
UBXN1-211ENST00000531056 RAB19A4D1S5 217 aa12.92□□□□□ -0.34
UBXN1-211ENST00000531056 CXCL1P09341 107 aa12.92□□□□□ -0.34
UBXN1-211ENST00000531056 CEBPGP53567 150 aa12.92□□□□□ -0.34
UBXN1-211ENST00000531056 RPL19P84098 196 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms