RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 HOXA5P20719 270 aa15.01□□□□□ -0.01
CAPN1-220ENST00000530567 POM121L12Q8N7R1 296 aa15.01□□□□□ -0.01
CAPN1-220ENST00000530567 OR2D3Q8NGH3 330 aa15.01□□□□□ -0.01
CAPN1-220ENST00000530567 KLK5Q9Y337 293 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-220ENST00000530567 PLECQ15149 4684 aaKnown RBP15.01□□□□□ -0.01
CAPN1-220ENST00000530567 ZNF876PQ49A33 203 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 SOHLH1Q5JUK2 328 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 F5H768 121 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 MED14OSP0DP75 135 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 GZMBP10144 247 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 TMEM241Q24JQ0 296 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 FAM231DQ6ZW35 169 aa15□□□□□ -0.01
CAPN1-220ENST00000530567 NACAE9PAV3 2078 aa14.99□□□□□ -0.01
CAPN1-220ENST00000530567 SFTA3P0C7M3 94 aa14.99□□□□□ -0.01
CAPN1-220ENST00000530567 RPL23P62829 140 aaKnown RBP14.99□□□□□ -0.01
CAPN1-220ENST00000530567 SSBP4Q9BWG4 385 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-220ENST00000530567 NAT8Q9UHE5 227 aa14.99□□□□□ -0.01
CAPN1-220ENST00000530567 IGLL5B9A064 214 aa14.98□□□□□ -0.01
CAPN1-220ENST00000530567 SNAI2O43623 268 aa14.98□□□□□ -0.01
CAPN1-220ENST00000530567 IGHV3-53P01767 116 aa14.98□□□□□ -0.01
CAPN1-220ENST00000530567 RPS20P60866 119 aaKnown RBP14.98□□□□□ -0.01
CAPN1-220ENST00000530567 RPP21Q9H633 154 aaKnown RBP14.98□□□□□ -0.01
CAPN1-220ENST00000530567 IGHV4-4A0A075B6R2 117 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 TRAV4A0A0B4J268 109 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 LINC00862A6NCI5 91 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 OR5AL1P0C617 328 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 IGLC6P0CF74 106 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 PIK3CD-AS1Q5SR53 167 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 DMRTA1Q5VZB9 504 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 TMEM88Q6PEY1 159 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 ZNF479Q96JC4 524 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 NDUFAF3Q9BU61 184 aa14.97□□□□□ -0.01
CAPN1-220ENST00000530567 NXPH4O95158 308 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 UQCC3Q6UW78 93 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 COMMD7Q86VX2 200 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 ISOC2Q96AB3 205 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 FAM210BQ96KR6 192 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 PHLDA3Q9Y5J5 127 aa14.96□□□□□ -0.01
CAPN1-220ENST00000530567 RS1O15537 224 aa14.95□□□□□ -0.02
CAPN1-220ENST00000530567 ERVFC1-1P60608 527 aa14.95□□□□□ -0.02
CAPN1-220ENST00000530567 CFAP126Q5VTH2 177 aa14.95□□□□□ -0.02
CAPN1-220ENST00000530567 OR10AG1Q8NH19 301 aa14.95□□□□□ -0.02
CAPN1-220ENST00000530567 APLNQ9ULZ1 77 aa14.95□□□□□ -0.02
CAPN1-220ENST00000530567 FHL2Q14192 279 aa14.94□□□□□ -0.02
CAPN1-220ENST00000530567 ADIRFQ15847 76 aa14.94□□□□□ -0.02
CAPN1-220ENST00000530567 OSTCQ9NRP0 149 aa14.94□□□□□ -0.02
CAPN1-220ENST00000530567 XKRY2A2RUG3 117 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 M0R381 172 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 GATCO43716 136 aaKnown RBP14.93□□□□□ -0.02
CAPN1-220ENST00000530567 ZFP82Q8N141 532 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 FER1L6-AS1Q8NA97 138 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 OR4C5Q8NGB2 326 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 JPT2Q9H910 190 aa14.93□□□□□ -0.02
CAPN1-220ENST00000530567 MUC21A0A0G2JKD1 596 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 MUC21A0A140T8X8 626 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 TCTAP57738 103 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 CT83Q5H943 113 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 SYT8Q8NBV8 401 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 TRAV26-1A0A087WT03 109 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 ADCYAP1P18509 176 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 GTSF1Q8WW33 167 aa14.92□□□□□ -0.02
CAPN1-220ENST00000530567 A8MWV9 139 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 CTRLP40313 264 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 UFSP1Q6NVU6 142 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 SFRP2Q96HF1 295 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 VSIG2Q96IQ7 327 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 TPPP3Q9BW30 176 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 SAMD10Q9BYL1 202 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 V9GYV3 84 aa14.91□□□□□ -0.02
CAPN1-220ENST00000530567 TMEM218A2RU14 115 aa14.9□□□□□ -0.02
CAPN1-220ENST00000530567 ALMS1Q8TCU4 4167 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 A0A0J9YY99 117 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 A0A1W2PPQ1 181 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 CRYBA4P53673 196 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 LYZL1Q6UWQ5 148 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 PRO0255Q9UI72 69 aa14.89□□□□□ -0.03
CAPN1-220ENST00000530567 TRGV4A0A0C4DH28 118 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 A8MWL6 223 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 GATA1P15976 413 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-220ENST00000530567 SPANXN1Q5VSR9 72 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 C15orf54Q8N8G6 183 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 CNFNQ9BYD5 112 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 HHLA3Q9XRX5 114 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 DNAH1Q9P2D7 4330 aa14.88□□□□□ -0.03
CAPN1-220ENST00000530567 IGHV3-73A0A0B4J1V6 119 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 F2Z2F3 143 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 H3BNG1 76 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 CRYGDP07320 174 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 C15orf53Q8NAA6 179 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 OR10G8Q8NGN5 311 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 LYSTQ99698 3801 aa14.87□□□□□ -0.03
CAPN1-220ENST00000530567 CIDEAO60543 219 aa14.86□□□□□ -0.03
CAPN1-220ENST00000530567 SSTP61278 116 aa14.86□□□□□ -0.03
CAPN1-220ENST00000530567 SLAQ13239 276 aa14.86□□□□□ -0.03
CAPN1-220ENST00000530567 ZFP2Q6ZN57 461 aa14.86□□□□□ -0.03
CAPN1-220ENST00000530567 TSKUQ8WUA8 353 aa14.86□□□□□ -0.03
CAPN1-220ENST00000530567 KMT2CQ8NEZ4 4911 aaKnown RBP14.86□□□□□ -0.03
CAPN1-220ENST00000530567 A0A087WWL8 130 aa14.85□□□□□ -0.03
CAPN1-220ENST00000530567 FOXA3P55318 350 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-220ENST00000530567 CACNG7P62955 275 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms