RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 HMGB3O15347 200 aaKnown RBP9.82□□□□□ -0.84
CAPN1-219ENST00000530495 GCGP01275 180 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 TCRAP04437 139 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 PET100P0DJ07 73 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 RAB2AP61019 212 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 PSG8Q9UQ74 426 aa9.82□□□□□ -0.84
CAPN1-219ENST00000530495 A0A087WWC5 75 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 GGTLC3B5MD39 225 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 K7EQM0 130 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 C5orf17Q8NAS9 161 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 PARLQ9H300 379 aa9.81□□□□□ -0.84
CAPN1-219ENST00000530495 RNF222A6NCQ9 220 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 GAGE12JA6NER3 117 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 A8MWV9 139 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 INMT-MINDY4F8WBC2 141 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 ARL14EPLP0DKL9 152 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
CAPN1-219ENST00000530495 GAGE1Q13065 139 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 GAGE4Q13068 117 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 GAGE5Q13069 117 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 LINC01620Q4KN68 170 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 SMUG1Q53HV7 270 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 CYB561D1Q8N8Q1 229 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 Q8N976 141 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 Q9UF83 564 aa9.8□□□□□ -0.84
CAPN1-219ENST00000530495 STAG3L2P0CL84 134 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 STAG3L3P0CL85 134 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-219ENST00000530495 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
CAPN1-219ENST00000530495 ZFP69Q49AA0 526 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 SAPCD1Q5SSQ6 148 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 OR2T35Q8NGX2 323 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 LINC00479Q96M42 142 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
CAPN1-219ENST00000530495 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 UPK1BO75841 260 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 OXTP01178 125 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 UFSP1Q6NVU6 142 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 SYT8Q8NBV8 401 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 RMI2Q96E14 147 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 MARVELD1Q9BSK0 173 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
CAPN1-219ENST00000530495 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
CAPN1-219ENST00000530495 GCHFRP30047 84 aa9.77□□□□□ -0.85
CAPN1-219ENST00000530495 CDC34P49427 236 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-219ENST00000530495 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
CAPN1-219ENST00000530495 IFITM3Q01628 133 aa9.77□□□□□ -0.85
CAPN1-219ENST00000530495 LGALSLQ3ZCW2 172 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-219ENST00000530495 CIRBP-AS1Q8TBR5 109 aa9.77□□□□□ -0.85
CAPN1-219ENST00000530495 RAB24Q969Q5 203 aa9.77□□□□□ -0.85
CAPN1-219ENST00000530495 SSNA1O43805 119 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 SEC11BP0C7V7 166 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
CAPN1-219ENST00000530495 NIT1Q86X76 327 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-219ENST00000530495 OR2G3Q8NGZ4 309 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 JPT2Q9H910 190 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 URGCP-MRPS24S4R325 110 aa9.76□□□□□ -0.85
CAPN1-219ENST00000530495 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
CAPN1-219ENST00000530495 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
CAPN1-219ENST00000530495 IGKV2D-24A0A075B6R9 120 aa9.74□□□□□ -0.85
CAPN1-219ENST00000530495 ASIPP42127 132 aa9.74□□□□□ -0.85
CAPN1-219ENST00000530495 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
CAPN1-219ENST00000530495 TMEM167BQ9NRX6 74 aa9.74□□□□□ -0.85
CAPN1-219ENST00000530495 KLK12Q9UKR0 248 aa9.74□□□□□ -0.85
CAPN1-219ENST00000530495 RHODO00212 210 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 CXorf1O96002 111 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 DEFA1P59665 94 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 DEFA3P59666 94 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 ATRAIDQ6UW56 229 aa9.73□□□□□ -0.85
CAPN1-219ENST00000530495 PSMG3Q9BT73 122 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-219ENST00000530495 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 MBP02144 154 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 SERF2P84101 59 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 ELOBQ15370 118 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 CHCHD7Q9BUK0 85 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 ARL2-SNX15V9GYD0 113 aa9.72□□□□□ -0.85
CAPN1-219ENST00000530495 A0A087WX48 190 aa9.71□□□□□ -0.86
CAPN1-219ENST00000530495 TRAV34A0A0B4J273 112 aa9.71□□□□□ -0.86
CAPN1-219ENST00000530495 A0A1W2PRE2 83 aa9.71□□□□□ -0.86
CAPN1-219ENST00000530495 B4DEV8 164 aa9.71□□□□□ -0.86
CAPN1-219ENST00000530495 ATP6V0CP27449 155 aa9.71□□□□□ -0.86
CAPN1-219ENST00000530495 UBE2WQ96B02 151 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms