RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
CAPN1-218ENST00000530442 SCRT2Q9NQ03 307 aa7.73□□□□□ -1.17
CAPN1-218ENST00000530442 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
CAPN1-218ENST00000530442 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
CAPN1-218ENST00000530442 LY96Q9Y6Y9 160 aa7.73□□□□□ -1.17
CAPN1-218ENST00000530442 DNAH6Q9C0G6 4158 aa7.73□□□□□ -1.17
CAPN1-218ENST00000530442 RYR3Q15413 4870 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 IGHV4-4A0A075B6R2 117 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 IGLL5B9A064 214 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 F5H768 121 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 P01737 135 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 IGHV3-53P01767 116 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 ARMS2P0C7Q2 107 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 TMEM88Q6PEY1 159 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
CAPN1-218ENST00000530442 DAZAP1Q96EP5 407 aaKnown RBP7.72□□□□□ -1.17
CAPN1-218ENST00000530442 SNAI2O43623 268 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 MED14OSP0DP75 135 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 GZMBP10144 247 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 NUDT10Q8NFP7 164 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 OR2D3Q8NGH3 330 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 PTH2Q96A98 100 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 NUDT11Q96G61 164 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 ZNF479Q96JC4 524 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 KMT2AQ03164 3969 aa7.71□□□□□ -1.18
CAPN1-218ENST00000530442 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 IGLC6P0CF74 106 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 RPL23P62829 140 aaKnown RBP7.7□□□□□ -1.18
CAPN1-218ENST00000530442 SOHLH1Q5JUK2 328 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 NDUFAF3Q9BU61 184 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 RPP21Q9H633 154 aaKnown RBP7.7□□□□□ -1.18
CAPN1-218ENST00000530442 NAT8Q9UHE5 227 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 APLNQ9ULZ1 77 aa7.7□□□□□ -1.18
CAPN1-218ENST00000530442 RS1O15537 224 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 NXPH4O95158 308 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 OR5AL1P0C617 328 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
CAPN1-218ENST00000530442 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 CFAP126Q5VTH2 177 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 DMRTA1Q5VZB9 504 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 COMMD7Q86VX2 200 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 OR10AG1Q8NH19 301 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 ISOC2Q96AB3 205 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 FAM210BQ96KR6 192 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
CAPN1-218ENST00000530442 PHLDA3Q9Y5J5 127 aa7.69□□□□□ -1.18
CAPN1-218ENST00000530442 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 MUC21A0A0G2JKD1 596 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 A0A0J9YY99 117 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 MUC21A0A140T8X8 626 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 M0R381 172 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 TCTAP57738 103 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 ERVFC1-1P60608 527 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 FHL2Q14192 279 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 ADIRFQ15847 76 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 UQCC3Q6UW78 93 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 ZFP82Q8N141 532 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 FER1L6-AS1Q8NA97 138 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 OR4C5Q8NGB2 326 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 JPT2Q9H910 190 aa7.68□□□□□ -1.18
CAPN1-218ENST00000530442 XKRY2A2RUG3 117 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 LINC00862A6NCI5 91 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
CAPN1-218ENST00000530442 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 CTRLP40313 264 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 CT83Q5H943 113 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 UFSP1Q6NVU6 142 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 VSIG2Q96IQ7 327 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 OSTCQ9NRP0 149 aa7.67□□□□□ -1.18
CAPN1-218ENST00000530442 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 TRGV4A0A0C4DH28 118 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 A8MWV9 139 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
CAPN1-218ENST00000530442 CRYBA4P53673 196 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 C15orf53Q8NAA6 179 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 GTSF1Q8WW33 167 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 SFRP2Q96HF1 295 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 SAMD10Q9BYL1 202 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 V9GYV3 84 aa7.66□□□□□ -1.18
CAPN1-218ENST00000530442 A0A087WWL8 130 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 A0A1W2PPQ1 181 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 H3BNG1 76 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 LYZL1Q6UWQ5 148 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 CNFNQ9BYD5 112 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 PRO0255Q9UI72 69 aa7.65□□□□□ -1.18
CAPN1-218ENST00000530442 LCE6AA0A183 80 aa7.64□□□□□ -1.19
CAPN1-218ENST00000530442 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
CAPN1-218ENST00000530442 PAX4O43316 350 aa7.64□□□□□ -1.19
CAPN1-218ENST00000530442 NUDT3O95989 172 aa7.64□□□□□ -1.19
CAPN1-218ENST00000530442 CRYGDP07320 174 aa7.64□□□□□ -1.19
CAPN1-218ENST00000530442 SSTP61278 116 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms