RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 KNCNA6PVL3 124 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 M0R2N4 97 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 HLA-DQA1P01909 254 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 AMBPP02760 352 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 P0DMU3 169 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 FAM231AP0DMU4 169 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 FAM231CP0DMU5 169 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 MGST1P10620 155 aaKnown RBP4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 ZNF138P52744 262 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 GNG5P63218 68 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 HIST1H1AQ02539 215 aaPredicted RBP4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 FAM162BQ5T6X4 162 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 OR10J6PQ8NGY7 276 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 DCANP1Q8TF63 244 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 CLUHP3Q96NS8 147 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 PKD1P98161 4303 aa4.44□□□□□ -1.7
CHRNA6-202ENST00000529467 NACAE9PAV3 2078 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 TRAV8-2A0A0B4J237 113 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 TRAV34A0A0B4J273 112 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 PGPEP1LA6NFU8 196 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 F2Z2F3 143 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 M0R3E3 92 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 DUSP14O95147 198 aaKnown RBP4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 CRISP2P16562 243 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 RPS10P46783 165 aaKnown RBP4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 Q6ZR54 194 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 PRNTQ86SH4 94 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 LINC00479Q96M42 142 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 NDUFAF3Q9BU61 184 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 URGCP-MRPS24S4R325 110 aa4.43□□□□□ -1.7
CHRNA6-202ENST00000529467 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 A8MTW9 85 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 ZNF688P0C7X2 276 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 TSPOP30536 169 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 OR5I1Q13606 314 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 COA6Q5JTJ3 125 aaKnown RBP4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 ACTL10Q5JWF8 245 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 DNLZQ5SXM8 178 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 FOXI2Q6ZQN5 318 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 GATD1Q8NB37 220 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 ZNF738Q8NE65 137 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 OR8A1Q8NGG7 326 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 BORCS7Q96B45 105 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 FAM19A4Q96LR4 140 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 CNFNQ9BYD5 112 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 RNASE7Q9H1E1 156 aaKnown RBP4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 RPH3ALQ9UNE2 315 aa4.42□□□□□ -1.7
CHRNA6-202ENST00000529467 TRAV8-1A0A0A6YYK1 113 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 TGIF2-C20orf24A0A0A6YYL0 155 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 PCP4L1A6NKN8 68 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 HIGD1CA8MV81 97 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 H3BTX0 84 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 PHOX2AO14813 284 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 LEPP41159 167 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 HBBP68871 147 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 EBLN2Q6P2I7 272 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 ZNF705AQ6ZN79 300 aaPredicted RBP4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 FRZBQ92765 325 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 ZC2HC1AQ96GY0 325 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 KCNS1Q96KK3 526 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 NEU1Q99519 415 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 C20orf144Q9BQM9 153 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 XCL2Q9UBD3 114 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 TRAPPC1Q9Y5R8 145 aa4.41□□□□□ -1.7
CHRNA6-202ENST00000529467 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 IGKV2-40A0A087WW87 121 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 A0A0J9YX75 114 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 A0A1B0GUT8 65 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 A0A1B0GXF2 115 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 TMEM189A5PLL7 270 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 C5orf52A6NGY3 159 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF705FA8MVS1 300 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 KLLNB2CW77 178 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 H3BMM0 161 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 IGKV2D-40P01614 121 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 TRGC2P03986 189 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 OR5AL1P0C617 328 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF705DP0CH99 300 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF705BP0CI00 300 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 SPART-AS1P0CW21 52 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 RIGQ13278 110 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 PSMG4Q5JS54 123 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 PRR27Q6MZM9 219 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 ZNF493Q6ZR52 646 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 OR2D3Q8NGH3 330 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 PACRGQ96M98 296 aaPredicted RBP4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 VGLL1Q99990 258 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 C1QTNF4Q9BXJ3 329 aa4.4□□□□□ -1.71
CHRNA6-202ENST00000529467 HSPG2P98160 4391 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms