RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
CSDE1-212ENST00000529046 TRAV8-2A0A0B4J237 113 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 NBDYA0A0U1RRE5 68 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 H3BRN7 92 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 SFT2D2O95562 160 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 INSP01308 110 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 ATP5G1P05496 136 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 RPL7P18124 248 aaKnown RBP2.96□□□□□ -1.94
CSDE1-212ENST00000529046 CXCL3P19876 107 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 ATP5G3P48201 142 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 CCL18P55774 89 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 POLR2GP62487 172 aaKnown RBP eCLIP2.96□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF767PQ75MW2 155 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 UBE2DNLQ8IWF7 75 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 C6orf223Q8N319 242 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 TOMM5Q8N4H5 51 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 ZNRF2Q8NHG8 242 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 SMIM8Q96KF7 97 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 C18orf15Q96N68 181 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 UPK3BQ9BT76 320 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 SHANK2-AS3Q9BTD1 123 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 RSG1Q9BU20 258 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 TMEM147Q9BVK8 224 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 NPVFQ9HCQ7 196 aa2.96□□□□□ -1.94
CSDE1-212ENST00000529046 TIMM8BQ9Y5J9 83 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-212ENST00000529046 NAP1L6A6NFF2 107 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 F6UB75 175 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 H7BYZ3 331 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 M0R2N4 97 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 HYPMO75409 117 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 ADAP1O75689 374 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 IL5P05113 134 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 ORM2P19652 201 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 CDC34P49427 236 aaPredicted RBP2.95□□□□□ -1.94
CSDE1-212ENST00000529046 EMP1P54849 157 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 FXYD7P58549 80 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 DEFB1P60022 68 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 TTC32Q5I0X7 151 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 TMEM14EPQ6UXP3 125 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 CYP2G1PQ6ZSU1 146 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 BOD1L2Q8IYS8 172 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 OR8A1Q8NGG7 326 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 OR10J6PQ8NGY7 276 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 TMEM263Q8WUH6 116 aaKnown RBP2.95□□□□□ -1.94
CSDE1-212ENST00000529046 PPP1R14BQ96C90 147 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 ODF3Q96PU9 254 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 HIST1H4GQ99525 98 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 LINC00467Q9BRT7 94 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 SLC50A1Q9BRV3 221 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 TMEM208Q9BTX3 173 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
CSDE1-212ENST00000529046 HIGD1AQ9Y241 93 aa2.95□□□□□ -1.94
CSDE1-212ENST00000529046 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
CSDE1-212ENST00000529046 C9orf170A2RU37 121 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF705GA8MUZ8 300 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-212ENST00000529046 K7EP13 123 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 M0R2Z0 102 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 EIF3GO75821 320 aaKnown RBP eCLIP2.94□□□□□ -1.94
CSDE1-212ENST00000529046 NDUFB6O95139 128 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 IAPPP10997 89 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 PPP1R1AQ13522 171 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 OR2F1Q13607 317 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 GUK1Q16774 197 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 SPINK13Q1W4C9 94 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 SPANXN5Q5MJ07 72 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 LCN15Q6UWW0 184 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 PATE2Q6UY27 113 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 Q6ZN92 141 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 TMED4Q7Z7H5 227 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 BPIFA4PQ86YQ2 179 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 HSD17B11Q8NBQ5 300 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 OR10P1Q8NGE3 313 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 MCFD2Q8NI22 146 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 RXFP4Q8TDU9 374 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 SLC25A22Q9H936 323 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF331Q9NQX6 463 aaPredicted RBP2.94□□□□□ -1.94
CSDE1-212ENST00000529046 NAGKQ9UJ70 344 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 LINC00588Q9Y4M8 146 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 V9GYH0 126 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
CSDE1-212ENST00000529046 IGLV2-18A0A075B6J9 118 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 C16orf90A8MZG2 172 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 F5H768 121 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 SMKR1H3BMG3 65 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 K7EN84 100 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 NMBP08949 121 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 OR4E1P0C645 316 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 LINC00869P0C866 280 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 DEFB130BP0DP73 79 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 DEFB130AP0DP74 79 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 HTN3P15516 51 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 M6PRP20645 277 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 AKR1C1Q04828 323 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 CLINT1Q14677 625 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 TAL2Q16559 108 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 PYDC2Q56P42 97 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 SSX7Q7RTT5 188 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 BAP18Q8IXM2 172 aa2.93□□□□□ -1.94
CSDE1-212ENST00000529046 ZNF738Q8NE65 137 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 2187.1 ms