RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CCL24O00175 119 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 NCR2O95944 276 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 UQCR10Q9UDW1 63 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 SELENOKQ9Y6D0 94 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
ECHDC1-220ENST00000528402 TRGV11A0A075B6L2 103 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 IGHV1OR15-1A0A075B7D0 117 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 CD7P09564 240 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 LINC01545Q5VT33 79 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 AMTNQ6UX39 209 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 NRACQ8N912 160 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 RAX2Q96IS3 184 aa10.98□□□□□ -0.65
ECHDC1-220ENST00000528402 DEFB131AP59861 70 aa10.97□□□□□ -0.65
ECHDC1-220ENST00000528402 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
ECHDC1-220ENST00000528402 TMEM61Q8N0U2 210 aa10.97□□□□□ -0.65
ECHDC1-220ENST00000528402 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
ECHDC1-220ENST00000528402 ST20Q9HBF5 79 aa10.97□□□□□ -0.65
ECHDC1-220ENST00000528402 ZFHX3Q15911 3703 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 IGLV2-18A0A075B6J9 118 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 A0A096LNJ9 63 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 H3BMM0 161 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 CD28P10747 220 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 TENM4Q6N022 2769 aa10.96□□□□□ -0.65
ECHDC1-220ENST00000528402 IGHV3-16A0A0C4DH30 117 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 PDZD2O15018 2839 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 G0S2P27469 103 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 LAGE3Q14657 143 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 MXRA5Q9NR99 2828 aa10.95□□□□□ -0.66
ECHDC1-220ENST00000528402 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 M0R143 59 aa10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 SPINK13Q1W4C9 94 aa10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 ORMDL2Q53FV1 153 aa10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 C14orf178Q8N769 122 aaPredicted RBP10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
ECHDC1-220ENST00000528402 ATP5LO75964 103 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 IGKV3-20P01619 116 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 CITED2Q99967 270 aaPredicted RBP10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 MAP6D1Q9H9H5 199 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 CCDC168Q8NDH2 2452 aa10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 FLNAP21333 2647 aaKnown RBP10.93□□□□□ -0.66
ECHDC1-220ENST00000528402 TRAV12-2A0A075B6T6 113 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 GATA1P15976 413 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 PTH2Q96A98 100 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 C2orf88Q9BSF0 95 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 KNCNA6PVL3 124 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 FOSL1P15407 271 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 IGLL1P15814 213 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 Q8N1Y9 231 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 RASL10AQ92737 203 aa10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-220ENST00000528402 LY6G6DO95868 133 aa10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 MGPP08493 103 aa10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 PROK1P58294 105 aa10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 TLN2Q9Y4G6 2542 aa10.91□□□□□ -0.66
ECHDC1-220ENST00000528402 MUC4Q99102 2169 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 A0A1W2PRX2 142 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 LINC00315P59091 139 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 TMEM158Q8WZ71 300 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 GOLT1BQ9Y3E0 138 aa10.9□□□□□ -0.66
ECHDC1-220ENST00000528402 AGRNO00468 2067 aa10.89□□□□□ -0.67
ECHDC1-220ENST00000528402 CBY3A6NI87 242 aa10.89□□□□□ -0.67
ECHDC1-220ENST00000528402 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-220ENST00000528402 Q6ZN92 141 aa10.89□□□□□ -0.67
ECHDC1-220ENST00000528402 MDFICQ9P1T7 246 aa10.89□□□□□ -0.67
ECHDC1-220ENST00000528402 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 SONP18583 2426 aaKnown RBP10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 H0Y8G0 127 aa10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 NUTF2P61970 127 aaKnown RBP10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
ECHDC1-220ENST00000528402 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 VCYO14598 125 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 TCAPO15273 167 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 NUDT3O95989 172 aa10.87□□□□□ -0.67
ECHDC1-220ENST00000528402 INSP01308 110 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms