RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.26■□□□□ 0.03
SMIM3-201ENST00000526627 DSCR9P59020 149 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 AP1S3Q96PC3 154 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 CBY1Q9Y3M2 126 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 UFSP1Q6NVU6 142 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 MAPKAPK5-AS1Q8N8E1 139 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 CHAC1Q9BUX1 264 aa15.26■□□□□ 0.03
SMIM3-201ENST00000526627 CSPG4Q6UVK1 2322 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 SLC25A16P16260 332 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 NAA38Q9BRA0 125 aaKnown RBP15.25■□□□□ 0.03
SMIM3-201ENST00000526627 USP9XQ93008 2570 aaPredicted RBP15.25■□□□□ 0.03
SMIM3-201ENST00000526627 H3BUT2 72 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 K7EMI3 77 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 ID1P41134 155 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 WFDC12Q8WWY7 111 aa15.25■□□□□ 0.03
SMIM3-201ENST00000526627 FXYD2P54710 66 aa15.24■□□□□ 0.03
SMIM3-201ENST00000526627 LINC01356Q8N9X3 169 aa15.24■□□□□ 0.03
SMIM3-201ENST00000526627 SCGB3A1Q96QR1 104 aa15.24■□□□□ 0.03
SMIM3-201ENST00000526627 CACNA1AO00555 2505 aa15.24■□□□□ 0.03
SMIM3-201ENST00000526627 PLNP26678 52 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 NEXN-AS1Q8NBZ9 246 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 F8VRH5 84 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 H7C1H1 209 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 RAB37Q96AX2 223 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 CST9LQ9H4G1 147 aa15.23■□□□□ 0.03
SMIM3-201ENST00000526627 FLNCQ14315 2725 aa15.22■□□□□ 0.03
SMIM3-201ENST00000526627 GAGE10A6NGK3 116 aa15.22■□□□□ 0.03
SMIM3-201ENST00000526627 GCSHP23434 173 aa15.22■□□□□ 0.03
SMIM3-201ENST00000526627 SAMD13Q5VXD3 122 aa15.22■□□□□ 0.03
SMIM3-201ENST00000526627 JPT2Q9H910 190 aa15.22■□□□□ 0.03
SMIM3-201ENST00000526627 GAGE12BA1L429 117 aa15.21■□□□□ 0.03
SMIM3-201ENST00000526627 FAM159AQ6UWV7 190 aa15.21■□□□□ 0.03
SMIM3-201ENST00000526627 C2orf66Q6UXQ4 117 aa15.21■□□□□ 0.03
SMIM3-201ENST00000526627 CSTL1Q9H114 145 aa15.21■□□□□ 0.03
SMIM3-201ENST00000526627 TMEM89A2RUT3 159 aa15.21■□□□□ 0.02
SMIM3-201ENST00000526627 IGSF10Q6WRI0 2623 aa15.21■□□□□ 0.02
SMIM3-201ENST00000526627 MAP1AP78559 2803 aaPredicted RBP15.2■□□□□ 0.02
SMIM3-201ENST00000526627 IGHV4OR15-8A0A075B7B6 117 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 A0A087WW49 117 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 TRAV12-3A0A0B4J271 114 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 CHTOPQ9Y3Y2 248 aaKnown RBP15.2■□□□□ 0.02
SMIM3-201ENST00000526627 ZNF688P0C7X2 276 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 NEGR1Q7Z3B1 354 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 MAPK1IP1LQ8NDC0 245 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 BAALCQ8WXS3 180 aa15.2■□□□□ 0.02
SMIM3-201ENST00000526627 K7EP34 96 aa15.19■□□□□ 0.02
SMIM3-201ENST00000526627 PPP1R17O96001 155 aa15.19■□□□□ 0.02
SMIM3-201ENST00000526627 TM2D2Q9BX73 214 aa15.19■□□□□ 0.02
SMIM3-201ENST00000526627 CDKN1BP46527 198 aa15.18■□□□□ 0.02
SMIM3-201ENST00000526627 ODF3Q96PU9 254 aa15.18■□□□□ 0.02
SMIM3-201ENST00000526627 K7EQG2 157 aa15.18■□□□□ 0.02
SMIM3-201ENST00000526627 CD7P09564 240 aa15.18■□□□□ 0.02
SMIM3-201ENST00000526627 CEND1Q8N111 149 aa15.18■□□□□ 0.02
SMIM3-201ENST00000526627 PHLDA1Q8WV24 401 aaPredicted RBP15.18■□□□□ 0.02
SMIM3-201ENST00000526627 A0A0J9YX75 114 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 A0A1W2PPM0 123 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 SMIM13P0DJ93 91 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 RPL32P62910 135 aaKnown RBP15.17■□□□□ 0.02
SMIM3-201ENST00000526627 OCIAD2Q56VL3 154 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 SUMO4Q6EEV6 95 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 GTF2H5Q6ZYL4 71 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 CRYBG3Q68DQ2 2970 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 CSMD2Q7Z408 3487 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 J3QLI3 93 aa15.17■□□□□ 0.02
SMIM3-201ENST00000526627 TGFAP01135 160 aa15.16■□□□□ 0.02
SMIM3-201ENST00000526627 POLR2KP53803 58 aaKnown RBP15.16■□□□□ 0.02
SMIM3-201ENST00000526627 C9orf85Q96MD7 179 aa15.16■□□□□ 0.02
SMIM3-201ENST00000526627 A0A087WWL8 130 aa15.16■□□□□ 0.02
SMIM3-201ENST00000526627 PRSS29PA6NIE9 313 aa15.16■□□□□ 0.02
SMIM3-201ENST00000526627 K7ERJ3 54 aa15.16■□□□□ 0.02
SMIM3-201ENST00000526627 IGHV3-16A0A0C4DH30 117 aa15.15■□□□□ 0.02
SMIM3-201ENST00000526627 SYNJ2BPP57105 145 aa15.15■□□□□ 0.02
SMIM3-201ENST00000526627 TRAV12-2A0A075B6T6 113 aa15.15■□□□□ 0.02
SMIM3-201ENST00000526627 UTP20O75691 2785 aaKnown RBP15.14■□□□□ 0.01
SMIM3-201ENST00000526627 DUSP14O95147 198 aaKnown RBP15.14■□□□□ 0.01
SMIM3-201ENST00000526627 TSHBP01222 138 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 FSHBP01225 129 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 IGKV3-20P01619 116 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 LGALS1P09382 135 aaKnown RBP15.14■□□□□ 0.01
SMIM3-201ENST00000526627 MDFICQ9P1T7 246 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 CRYGDP07320 174 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 ZNF702PQ9H963 129 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 VPREB3Q9UKI3 123 aa15.14■□□□□ 0.01
SMIM3-201ENST00000526627 SNRPD3P62318 126 aaKnown RBP15.13■□□□□ 0.01
SMIM3-201ENST00000526627 TAL2Q16559 108 aa15.13■□□□□ 0.01
SMIM3-201ENST00000526627 FBN2P35556 2912 aa15.13■□□□□ 0.01
SMIM3-201ENST00000526627 LGALS9O00182 355 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 SAMD5Q5TGI4 173 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 AGRNO00468 2067 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 ZFP2Q6ZN57 461 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 DEFB104AQ8WTQ1 72 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 NHP2Q9NX24 153 aaKnown RBP15.12■□□□□ 0.01
SMIM3-201ENST00000526627 SPCS1Q9Y6A9 102 aa15.12■□□□□ 0.01
SMIM3-201ENST00000526627 IGIPA6NJ69 53 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 Q6YL49 198 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 Q8N1Y9 231 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 DUX5Q96PT3 197 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 CYSLTR1Q9Y271 337 aa15.11■□□□□ 0.01
SMIM3-201ENST00000526627 TRBV7-3A0A075B6L6 115 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms