RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HLA-DMBP28068 263 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 DEFB131AP59861 70 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 EGFEM1PQ0D2K5 195 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 PEA15Q15121 130 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 HAGHQ16775 308 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 COX19Q49B96 90 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 PSMG4Q5JS54 123 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 EBLN2Q6P2I7 272 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 FAM24BQ8N5W8 94 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 RNF182Q8N6D2 247 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 TXNDC17Q9BRA2 123 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 EIF5A2Q9GZV4 153 aaKnown RBP3.24□□□□□ -1.89
USP48-211ENST00000526044 MANBALQ9NQG1 85 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 OTORQ9NRC9 128 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
USP48-211ENST00000526044 YTHDF2Q9Y5A9 579 aaKnown RBP3.24□□□□□ -1.89
USP48-211ENST00000526044 A0A087WZ39 114 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 A0A1B0GVY2 172 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 C11orf94C9JXX5 98 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 M0R3E3 92 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 DUSP14O95147 198 aaKnown RBP3.23□□□□□ -1.89
USP48-211ENST00000526044 BCL2P10415 239 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
USP48-211ENST00000526044 LAGE3Q14657 143 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 ACTL10Q5JWF8 245 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 Q6ZVQ6 151 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 DEFB125Q8N687 156 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 C5orf17Q8NAS9 161 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 ZNF738Q8NE65 137 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 OR10J6PQ8NGY7 276 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 C11orf45Q8TAV5 145 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 RASL10AQ92737 203 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 HIST1H2BAQ96A08 127 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 RPUSD4Q96CM3 377 aaKnown RBP3.23□□□□□ -1.89
USP48-211ENST00000526044 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 RARRES2Q99969 163 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 TUBA4BQ9H853 241 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 RPS10P5Q9NQ39 176 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 ARL2-SNX15V9GYD0 113 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 ATRQ13535 2644 aa3.23□□□□□ -1.89
USP48-211ENST00000526044 RBAKDNA6NC62 111 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 KNCNA6PVL3 124 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 GGTLC3B5MD39 225 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 TMEM238C9JI98 176 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 F6UB75 175 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 H3BMM0 161 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 PDE6DO43924 150 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 TCRAP04437 139 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 ZNF705DP0CH99 300 aaPredicted RBP3.22□□□□□ -1.89
USP48-211ENST00000526044 ZNF705BP0CI00 300 aaPredicted RBP3.22□□□□□ -1.89
USP48-211ENST00000526044 PRB4P10163 310 aaPredicted RBP3.22□□□□□ -1.89
USP48-211ENST00000526044 ATP5G3P48201 142 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 DEFB1P60022 68 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 NUTF2P61970 127 aaKnown RBP3.22□□□□□ -1.89
USP48-211ENST00000526044 GNG5P63218 68 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 RIGQ13278 110 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 DEFB121Q5J5C9 76 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 ZNF506Q5JVG8 444 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 KPRPQ5T749 579 aaPredicted RBP3.22□□□□□ -1.89
USP48-211ENST00000526044 TMEM78Q5T7P6 136 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 GDF5OSQ5U4N7 250 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 FOXI2Q6ZQN5 318 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 Q8N377 158 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 OR4B1Q8NGF8 309 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 OR8A1Q8NGG7 326 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 TCEAL7Q9BRU2 100 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 AGPAT4-IT1Q9H0P7 198 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 SMDT1Q9H4I9 107 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 MED9Q9NWA0 146 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 TENM1Q9UKZ4 2725 aa3.22□□□□□ -1.89
USP48-211ENST00000526044 IGKV2-40A0A087WW87 121 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 LOC102724200A0A096LPH7 203 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 A0A0J9YX75 114 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 LINC00862A6NCI5 91 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 PEX7O00628 323 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 IGKV2D-40P01614 121 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 PRB2P02812 416 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 SRP19P09132 144 aaKnown RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 HLA-DRB4P13762 266 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 AKR1C3P42330 323 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 ZNF138P52744 262 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 UBE2G1P62253 170 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 FLI1Q01543 452 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 HIST1H1AQ02539 215 aaPredicted RBP3.21□□□□□ -1.9
USP48-211ENST00000526044 ERCC8Q13216 396 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 TMEM183BQ1AE95 376 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 GOLT1AQ6ZVE7 132 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 PRNTQ86SH4 94 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 CYB561D1Q8N8Q1 229 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 ZNF492Q9P255 531 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 PSG8Q9UQ74 426 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 KLF12Q9Y4X4 402 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 HLA-DRB4X5D2U9 266 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 SORL1Q92673 2214 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 CMYA5Q8N3K9 4069 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 COL6A5A8TX70 2615 aa3.21□□□□□ -1.9
USP48-211ENST00000526044 AGRNO00468 2067 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 TRAV8-1A0A0A6YYK1 113 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms