RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 IL17RELQ6ZVW7 336 aa8.66□□□□□ -1.02
CLNS1A-204ENST00000525428 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
CLNS1A-204ENST00000525428 CHD6Q8TD26 2715 aa8.66□□□□□ -1.02
CLNS1A-204ENST00000525428 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
CLNS1A-204ENST00000525428 RAI1Q7Z5J4 1906 aaPredicted RBP8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 LINC00694P0DN24 101 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 CD40P25942 277 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 RNF182Q8N6D2 247 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 NEXN-AS1Q8NBZ9 246 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 USP9XQ93008 2570 aaPredicted RBP8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 J3KRW8 73 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 IGHV1-46P01743 117 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
CLNS1A-204ENST00000525428 ASH1LQ9NR48 2969 aaKnown RBP8.65□□□□□ -1.03
CLNS1A-204ENST00000525428 K7EIM0 57 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 IGLV1-44P01699 117 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 FAM27E3Q08E93 113 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 C11orf21Q9P2W6 132 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 DCHS2Q6V1P9 2916 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 A4D1N5 150 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 COX6B1P14854 86 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 ZNF474Q6S9Z5 364 aaPredicted RBP8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 TMEM170BQ5T4T1 132 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 RAB1BQ9H0U4 201 aa8.64□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-66A0A0C4DH42 116 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 GLRXP35754 106 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 LYPD2Q6UXB3 125 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 CNFNQ9BYD5 112 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 MED13LQ71F56 2210 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 OOSP1A8MZH6 123 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 UCNP55089 124 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 TSPEAR-AS2P59090 65 aa8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
CLNS1A-204ENST00000525428 M0R381 172 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 CCL17Q92583 94 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 CSDC2Q9Y534 153 aaKnown RBP8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 A0A0G2JNJ9 132 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 PDE6HQ13956 83 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 PVRIGQ6DKI7 326 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 Q9UFV3 132 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 KLK5Q9Y337 293 aaPredicted RBP8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 CRYBG3Q68DQ2 2970 aa8.62□□□□□ -1.03
CLNS1A-204ENST00000525428 TIMM23O14925 209 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHG4P01861 327 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 HERVK_113P61574 105 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MBD3L4A6NDZ8 208 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MBD3L3A6NE82 208 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MBD3L5A6NJ08 208 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 H3BMM0 161 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 DUSP14O95147 198 aaKnown RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 Q6Q795 121 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MBD3L2Q8NHZ7 208 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 UBE2WQ96B02 151 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 LINC01587Q99440 93 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 MGPP08493 103 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 SLC25A15Q9Y619 301 aa8.61□□□□□ -1.03
CLNS1A-204ENST00000525428 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 COX7A1P24310 79 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 SUMO2P61956 95 aaKnown RBP8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 TMEM30BQ3MIR4 351 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 ORMDL2Q53FV1 153 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-33P01772 117 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 SMAD5-AS1Q9Y6J3 95 aa8.6□□□□□ -1.03
CLNS1A-204ENST00000525428 DLX6P56179 175 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 CDSNQ15517 529 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 CEMP1Q6PRD7 247 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 SLC25A29Q8N8R3 303 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 GATA4P43694 442 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 C9orf153Q5TBE3 101 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
CLNS1A-204ENST00000525428 LGALS9O00182 355 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 NDUFB3O43676 98 aa8.58□□□□□ -1.04
CLNS1A-204ENST00000525428 KLRB1Q12918 225 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms