RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 MED14OSP0DP75 135 aa12.46□□□□□ -0.41
PACSIN3-202ENST00000524509 Q6ZTI0 123 aa12.46□□□□□ -0.41
PACSIN3-202ENST00000524509 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
PACSIN3-202ENST00000524509 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
PACSIN3-202ENST00000524509 IGLV2-8P01709 118 aa12.45□□□□□ -0.42
PACSIN3-202ENST00000524509 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
PACSIN3-202ENST00000524509 F5H768 121 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 HTN3P15516 51 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 IFITM2Q01629 132 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 ZNF876PQ49A33 203 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 SOHLH1Q5JUK2 328 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 PHLDA3Q9Y5J5 127 aa12.44□□□□□ -0.42
PACSIN3-202ENST00000524509 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
PACSIN3-202ENST00000524509 IGLL5B9A064 214 aa12.43□□□□□ -0.42
PACSIN3-202ENST00000524509 LY6G6CO95867 125 aa12.43□□□□□ -0.42
PACSIN3-202ENST00000524509 TMEM241Q24JQ0 296 aa12.43□□□□□ -0.42
PACSIN3-202ENST00000524509 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
PACSIN3-202ENST00000524509 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 ARMS2P0C7Q2 107 aa12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 UQCC3Q6UW78 93 aa12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
PACSIN3-202ENST00000524509 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 A8MWV9 139 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 FAM231DQ6ZW35 169 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 ZFP82Q8N141 532 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 OR4C5Q8NGB2 326 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 NAT8Q9UHE5 227 aa12.41□□□□□ -0.42
PACSIN3-202ENST00000524509 IGHV4-4A0A075B6R2 117 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 PGPEP1LA6NFU8 196 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 F2Z2F3 143 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 H3BNG1 76 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 H3BVH4 76 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 OR5AL1P0C617 328 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 SCRT2Q9NQ03 307 aa12.4□□□□□ -0.42
PACSIN3-202ENST00000524509 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
PACSIN3-202ENST00000524509 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
PACSIN3-202ENST00000524509 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
PACSIN3-202ENST00000524509 RPP21Q9H633 154 aaKnown RBP12.39□□□□□ -0.43
PACSIN3-202ENST00000524509 TRGV4A0A0C4DH28 118 aa12.38□□□□□ -0.43
PACSIN3-202ENST00000524509 A8MWL6 223 aa12.38□□□□□ -0.43
PACSIN3-202ENST00000524509 CT83Q5H943 113 aa12.38□□□□□ -0.43
PACSIN3-202ENST00000524509 SSBP4Q9BWG4 385 aaPredicted RBP12.38□□□□□ -0.43
PACSIN3-202ENST00000524509 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
PACSIN3-202ENST00000524509 KMT2AQ03164 3969 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 K7EN84 100 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 RHODO00212 210 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 SNAI2O43623 268 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 GATCO43716 136 aaKnown RBP12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 FER1L6-AS1Q8NA97 138 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 RYR1P21817 5038 aa12.37□□□□□ -0.43
PACSIN3-202ENST00000524509 C9JQL5 133 aa12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 RS1O15537 224 aa12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 CACNG7P62955 275 aa12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 TMEM88Q6PEY1 159 aa12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 RNASE7Q9H1E1 156 aaKnown RBP12.36□□□□□ -0.43
PACSIN3-202ENST00000524509 KIAA1109Q2LD37 5005 aa12.35□□□□□ -0.43
PACSIN3-202ENST00000524509 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
PACSIN3-202ENST00000524509 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
PACSIN3-202ENST00000524509 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
PACSIN3-202ENST00000524509 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
PACSIN3-202ENST00000524509 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 M0R381 172 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 PAX4O43316 350 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 P0DMU3 169 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 ADIRFQ15847 76 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 ZNF575Q86XF7 245 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
PACSIN3-202ENST00000524509 NXPH4O95158 308 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 HOXA5P20719 270 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 RPL23P62829 140 aaKnown RBP12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 FHL2Q14192 279 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 ISOC2Q96AB3 205 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 BORCS7Q96B45 105 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 SFRP2Q96HF1 295 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 ZNF479Q96JC4 524 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 GFRA4Q9GZZ7 299 aa12.33□□□□□ -0.44
PACSIN3-202ENST00000524509 LINC00862A6NCI5 91 aa12.32□□□□□ -0.44
PACSIN3-202ENST00000524509 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
PACSIN3-202ENST00000524509 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms