RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CRXO43186 299 aaPredicted RBP15.33■□□□□ 0.04
SQLE-206ENST00000523430 CD7P09564 240 aa15.33■□□□□ 0.04
SQLE-206ENST00000523430 LINC00482Q8N8I6 264 aa15.33■□□□□ 0.04
SQLE-206ENST00000523430 SORL1Q92673 2214 aa15.33■□□□□ 0.04
SQLE-206ENST00000523430 RAB4AP20338 218 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 AMTP48728 403 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 TDRG1Q3Y452 100 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 NIT1Q86X76 327 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 ORMDL3Q8N138 153 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 FAM19A2Q8N3H0 131 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 PHLDA3Q9Y5J5 127 aa15.32■□□□□ 0.04
SQLE-206ENST00000523430 NIPBLQ6KC79 2804 aaeCLIP15.31■□□□□ 0.04
SQLE-206ENST00000523430 Q6ZWC4 215 aa15.31■□□□□ 0.04
SQLE-206ENST00000523430 PRELID3AQ96N28 172 aa15.31■□□□□ 0.04
SQLE-206ENST00000523430 OR11H12B2RN74 326 aa15.3■□□□□ 0.04
SQLE-206ENST00000523430 GAS8-AS1O95177 125 aa15.3■□□□□ 0.04
SQLE-206ENST00000523430 IGHV1OR15-1A0A075B7D0 117 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 HSBP1O75506 76 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 CKS2P33552 79 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 Q8N1Y9 231 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 IGHV3-16A0A0C4DH30 117 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 SPATA3Q8NHX4 192 aa15.29■□□□□ 0.04
SQLE-206ENST00000523430 BAHCC1Q9P281 2608 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 NPYP01303 97 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 PMCHL1Q16048 86 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 SMIM15Q7Z3B0 74 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 NIT2Q9NQR4 276 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 MDFICQ9P1T7 246 aa15.28■□□□□ 0.04
SQLE-206ENST00000523430 NXPH4O95158 308 aa15.27■□□□□ 0.04
SQLE-206ENST00000523430 JOSD1Q15040 202 aaPredicted RBP15.27■□□□□ 0.04
SQLE-206ENST00000523430 CITED1Q99966 193 aa15.27■□□□□ 0.04
SQLE-206ENST00000523430 OR2K2Q8NGT1 345 aa15.27■□□□□ 0.03
SQLE-206ENST00000523430 CHCHD1Q96BP2 118 aaKnown RBP15.27■□□□□ 0.03
SQLE-206ENST00000523430 WFDC10AQ9H1F0 79 aa15.27■□□□□ 0.03
SQLE-206ENST00000523430 TRAV26-2A0A0B4J265 109 aa15.26■□□□□ 0.03
SQLE-206ENST00000523430 LINC00614P0C842 121 aa15.26■□□□□ 0.03
SQLE-206ENST00000523430 STHQ8IWL8 128 aa15.26■□□□□ 0.03
SQLE-206ENST00000523430 C9orf85Q96MD7 179 aa15.26■□□□□ 0.03
SQLE-206ENST00000523430 LOC389332A0A1B0GUA5 103 aa15.25■□□□□ 0.03
SQLE-206ENST00000523430 GATA1P15976 413 aaPredicted RBP15.25■□□□□ 0.03
SQLE-206ENST00000523430 TRPT1Q86TN4 253 aaKnown RBP15.25■□□□□ 0.03
SQLE-206ENST00000523430 IGHV1-24A0A0C4DH33 117 aa15.25■□□□□ 0.03
SQLE-206ENST00000523430 IFI27P40305 119 aaPredicted RBP15.25■□□□□ 0.03
SQLE-206ENST00000523430 BEAN1Q3B7T3 259 aa15.25■□□□□ 0.03
SQLE-206ENST00000523430 C14orf178Q8N769 122 aaPredicted RBP15.25■□□□□ 0.03
SQLE-206ENST00000523430 CLUHP3Q96NS8 147 aa15.24■□□□□ 0.03
SQLE-206ENST00000523430 CBY3A6NI87 242 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 PPBPP02775 128 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 HTN1P15515 57 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 AP1S3Q96PC3 154 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 C19orf73Q9NVV2 129 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 MUC4Q99102 2169 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 TENM1Q9UKZ4 2725 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 PRM2P04554 102 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 PRSS3P2Q8NHM4 247 aa15.23■□□□□ 0.03
SQLE-206ENST00000523430 TRGV11A0A075B6L2 103 aa15.22■□□□□ 0.03
SQLE-206ENST00000523430 INSP01308 110 aa15.22■□□□□ 0.03
SQLE-206ENST00000523430 DPH3P1Q9H4G8 78 aa15.22■□□□□ 0.03
SQLE-206ENST00000523430 TNFRSF6BO95407 300 aa15.21■□□□□ 0.03
SQLE-206ENST00000523430 FA2HQ7L5A8 372 aa15.21■□□□□ 0.03
SQLE-206ENST00000523430 JPT2Q9H910 190 aa15.21■□□□□ 0.03
SQLE-206ENST00000523430 XCL2Q9UBD3 114 aa15.21■□□□□ 0.03
SQLE-206ENST00000523430 KRTDAPP60985 99 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 AP5S1Q9NUS5 200 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 PCP4L1A6NKN8 68 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 MGPP08493 103 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 NRACQ8N912 160 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 LAMTOR2Q9Y2Q5 125 aa15.2■□□□□ 0.02
SQLE-206ENST00000523430 SCGB1D1O95968 90 aa15.19■□□□□ 0.02
SQLE-206ENST00000523430 CMC4P56277 68 aaPredicted RBP15.19■□□□□ 0.02
SQLE-206ENST00000523430 FAM110AQ9BQ89 295 aa15.19■□□□□ 0.02
SQLE-206ENST00000523430 MAP1LC3AQ9H492 121 aa15.19■□□□□ 0.02
SQLE-206ENST00000523430 MRAP2Q96G30 205 aa15.18■□□□□ 0.02
SQLE-206ENST00000523430 KIF25-AS1Q9Y6Z4 181 aa15.18■□□□□ 0.02
SQLE-206ENST00000523430 KRTAP24-1Q3LI83 254 aa15.18■□□□□ 0.02
SQLE-206ENST00000523430 A0A087WWL8 130 aa15.17■□□□□ 0.02
SQLE-206ENST00000523430 LINC01587Q99440 93 aa15.17■□□□□ 0.02
SQLE-206ENST00000523430 C3orf79P0CE67 100 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 LINC00315P59091 139 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 LINC00173Q6ZV60 143 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 SYT8Q8NBV8 401 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 C20orf144Q9BQM9 153 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 Q8N976 141 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 JMJD1CQ15652 2540 aa15.16■□□□□ 0.02
SQLE-206ENST00000523430 VWFP04275 2813 aa15.15■□□□□ 0.02
SQLE-206ENST00000523430 A0A096LNJ9 63 aa15.15■□□□□ 0.02
SQLE-206ENST00000523430 RPL35AP18077 110 aaKnown RBP15.15■□□□□ 0.02
SQLE-206ENST00000523430 C1orf158Q8N1D5 194 aa15.15■□□□□ 0.02
SQLE-206ENST00000523430 LINC00467Q9BRT7 94 aa15.15■□□□□ 0.02
SQLE-206ENST00000523430 SMIM17P0DL12 118 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 NUTF2P61970 127 aaKnown RBP15.14■□□□□ 0.01
SQLE-206ENST00000523430 ZNF876PQ49A33 203 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 C9orf66Q5T8R8 295 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 POM121L12Q8N7R1 296 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 RASL10AQ92737 203 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 RPL39LQ96EH5 51 aaKnown RBP15.14■□□□□ 0.01
SQLE-206ENST00000523430 LEPROTL1O95214 131 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 GIG44P09565 113 aaPredicted RBP15.14■□□□□ 0.01
SQLE-206ENST00000523430 GSN-AS1Q9NRJ2 163 aa15.14■□□□□ 0.01
SQLE-206ENST00000523430 IGHV3OR16-12A0A075B7B8 117 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms