RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HMCN2Q8NDA2 5059 aa17.03■□□□□ 0.32
PVT1-219ENST00000523427 IGKV2D-24A0A075B6R9 120 aa17.02■□□□□ 0.32
PVT1-219ENST00000523427 CYCSP99999 105 aaKnown RBP17.02■□□□□ 0.32
PVT1-219ENST00000523427 Q9UF83 564 aa17.02■□□□□ 0.32
PVT1-219ENST00000523427 RNASE3P12724 160 aaKnown RBP17.01■□□□□ 0.31
PVT1-219ENST00000523427 LGALSLQ3ZCW2 172 aaPredicted RBP17.01■□□□□ 0.31
PVT1-219ENST00000523427 ARL6IP6Q8N6S5 226 aa17.01■□□□□ 0.31
PVT1-219ENST00000523427 CHAC1Q9BUX1 264 aa17.01■□□□□ 0.31
PVT1-219ENST00000523427 UBR4Q5T4S7 5183 aa17.01■□□□□ 0.31
PVT1-219ENST00000523427 ENKURQ8TC29 256 aa17■□□□□ 0.31
PVT1-219ENST00000523427 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
PVT1-219ENST00000523427 SH3BGRL3Q9H299 93 aa17■□□□□ 0.31
PVT1-219ENST00000523427 PARLQ9H300 379 aa17■□□□□ 0.31
PVT1-219ENST00000523427 PLA2G2DQ9UNK4 145 aa17■□□□□ 0.31
PVT1-219ENST00000523427 PSG8Q9UQ74 426 aa17■□□□□ 0.31
PVT1-219ENST00000523427 RPL12P30050 165 aaKnown RBP16.99■□□□□ 0.31
PVT1-219ENST00000523427 PRNTQ86SH4 94 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 Q8N976 141 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 CIRBP-AS1Q8TBR5 109 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 WFDC1Q9HC57 220 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 COX11Q9Y6N1 276 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 URGCP-MRPS24S4R325 110 aa16.99■□□□□ 0.31
PVT1-219ENST00000523427 TCRAP04437 139 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 ARL14EPLP0DKL9 152 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 H2BFSP57053 126 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 KRTAP10-4P60372 401 aaPredicted RBP16.98■□□□□ 0.31
PVT1-219ENST00000523427 OR10G9Q8NGN4 311 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 OR10G7Q8NGN6 311 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 RMI2Q96E14 147 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 KLK12Q9UKR0 248 aa16.98■□□□□ 0.31
PVT1-219ENST00000523427 K7EQM0 130 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 MPC2O95563 127 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 S100A4P26447 101 aaKnown RBP16.97■□□□□ 0.31
PVT1-219ENST00000523427 ZFP69Q49AA0 526 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 SMUG1Q53HV7 270 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 C14orf178Q8N769 122 aaPredicted RBP16.97■□□□□ 0.31
PVT1-219ENST00000523427 CYB561D1Q8N8Q1 229 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 PTH2Q96A98 100 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 JPT2Q9H910 190 aa16.97■□□□□ 0.31
PVT1-219ENST00000523427 OXTP01178 125 aa16.96■□□□□ 0.31
PVT1-219ENST00000523427 IGLV2-8P01709 118 aa16.96■□□□□ 0.31
PVT1-219ENST00000523427 ASAH1Q13510 395 aa16.96■□□□□ 0.31
PVT1-219ENST00000523427 C5orf17Q8NAS9 161 aa16.96■□□□□ 0.31
PVT1-219ENST00000523427 A0A087WWC5 75 aa16.95■□□□□ 0.3
PVT1-219ENST00000523427 RNF222A6NCQ9 220 aa16.95■□□□□ 0.3
PVT1-219ENST00000523427 A8MWV9 139 aa16.95■□□□□ 0.3
PVT1-219ENST00000523427 LINC00694P0DN24 101 aa16.95■□□□□ 0.3
PVT1-219ENST00000523427 FLI1Q01543 452 aaPredicted RBP16.95■□□□□ 0.3
PVT1-219ENST00000523427 UBE2WQ96B02 151 aa16.95■□□□□ 0.3
PVT1-219ENST00000523427 SERTM2A0A1B0GWG4 89 aa16.94■□□□□ 0.3
PVT1-219ENST00000523427 ZFP2Q6ZN57 461 aa16.94■□□□□ 0.3
PVT1-219ENST00000523427 PET100P0DJ07 73 aa16.93■□□□□ 0.3
PVT1-219ENST00000523427 SUMO1P63165 101 aaKnown RBP16.93■□□□□ 0.3
PVT1-219ENST00000523427 FAT3Q8TDW7 4589 aa16.92■□□□□ 0.3
PVT1-219ENST00000523427 INMT-MINDY4F8WBC2 141 aa16.92■□□□□ 0.3
PVT1-219ENST00000523427 IGLV2-11P01706 119 aa16.92■□□□□ 0.3
PVT1-219ENST00000523427 CDC34P49427 236 aaPredicted RBP16.92■□□□□ 0.3
PVT1-219ENST00000523427 NIT1Q86X76 327 aa16.92■□□□□ 0.3
PVT1-219ENST00000523427 IGKV3D-20A0A0C4DH25 116 aa16.91■□□□□ 0.3
PVT1-219ENST00000523427 SSNA1O43805 119 aa16.91■□□□□ 0.3
PVT1-219ENST00000523427 FGF8P55075 233 aaPredicted RBP16.91■□□□□ 0.3
PVT1-219ENST00000523427 LINC00479Q96M42 142 aa16.91■□□□□ 0.3
PVT1-219ENST00000523427 FAM74A4Q5TZK3 123 aa16.9■□□□□ 0.3
PVT1-219ENST00000523427 A0A087WX48 190 aa16.89■□□□□ 0.29
PVT1-219ENST00000523427 GCHFRP30047 84 aa16.89■□□□□ 0.29
PVT1-219ENST00000523427 ASIPP42127 132 aa16.89■□□□□ 0.29
PVT1-219ENST00000523427 EPDR1Q9UM22 224 aa16.89■□□□□ 0.29
PVT1-219ENST00000523427 TRAV34A0A0B4J273 112 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 SEC11BP0C7V7 166 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 STAG3L2P0CL84 134 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 STAG3L3P0CL85 134 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 DMRTA1Q5VZB9 504 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 RAB24Q969Q5 203 aa16.88■□□□□ 0.29
PVT1-219ENST00000523427 H3BVH4 76 aa16.87■□□□□ 0.29
PVT1-219ENST00000523427 SAPCD1Q5SSQ6 148 aa16.87■□□□□ 0.29
PVT1-219ENST00000523427 KCNIP4Q6PIL6 250 aa16.87■□□□□ 0.29
PVT1-219ENST00000523427 HSD17B11Q8NBQ5 300 aa16.87■□□□□ 0.29
PVT1-219ENST00000523427 OR2G3Q8NGZ4 309 aa16.87■□□□□ 0.29
PVT1-219ENST00000523427 RPL37AP61513 92 aaKnown RBP16.86■□□□□ 0.29
PVT1-219ENST00000523427 UFSP1Q6NVU6 142 aa16.86■□□□□ 0.29
PVT1-219ENST00000523427 A0A087WWL8 130 aa16.85■□□□□ 0.29
PVT1-219ENST00000523427 FABP5P3A8MUU1 101 aa16.84■□□□□ 0.29
PVT1-219ENST00000523427 TMEM262E9PQX1 116 aa16.84■□□□□ 0.29
PVT1-219ENST00000523427 ELOBQ15370 118 aa16.84■□□□□ 0.29
PVT1-219ENST00000523427 GRIFINA4D1Z8 144 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 B4DEV8 164 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 M0R036 132 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 PIK3CD-AS1Q5SR53 167 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 IL36BQ9NZH7 164 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 ARL2-SNX15V9GYD0 113 aa16.83■□□□□ 0.28
PVT1-219ENST00000523427 RHODO00212 210 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 UPK1BO75841 260 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 ARMS2P0C7Q2 107 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 HNRNPA3P51991 378 aaKnown RBP16.82■□□□□ 0.28
PVT1-219ENST00000523427 SUN5Q8TC36 379 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 S100ZQ8WXG8 99 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 C1orf43Q9BWL3 253 aa16.82■□□□□ 0.28
PVT1-219ENST00000523427 C14orf177Q52M58 125 aa16.81■□□□□ 0.28
PVT1-219ENST00000523427 OR11H4Q8NGC9 324 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms