RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
MRPS28-209ENST00000522987 SUMO1P63165 101 aaKnown RBP10.25□□□□□ -0.77
MRPS28-209ENST00000522987 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
MRPS28-209ENST00000522987 LINC00299Q6ZSB3 139 aa10.25□□□□□ -0.77
MRPS28-209ENST00000522987 C5orf17Q8NAS9 161 aa10.25□□□□□ -0.77
MRPS28-209ENST00000522987 OR2T35Q8NGX2 323 aa10.25□□□□□ -0.77
MRPS28-209ENST00000522987 RAB24Q969Q5 203 aa10.25□□□□□ -0.77
MRPS28-209ENST00000522987 GTSF1LQ9H1H1 148 aa10.25□□□□□ -0.77
MRPS28-209ENST00000522987 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 IGLV2-11P01706 119 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
MRPS28-209ENST00000522987 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
MRPS28-209ENST00000522987 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 SH3BGRL3Q9H299 93 aa10.24□□□□□ -0.77
MRPS28-209ENST00000522987 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
MRPS28-209ENST00000522987 J3QL48 77 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 K7EQM0 130 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 ATP6V0CP27449 155 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 ZFP69Q49AA0 526 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 DNAJC30Q96LL9 226 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 PARLQ9H300 379 aa10.23□□□□□ -0.77
MRPS28-209ENST00000522987 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
MRPS28-209ENST00000522987 S100A4P26447 101 aaKnown RBP10.22□□□□□ -0.77
MRPS28-209ENST00000522987 DEFA1P59665 94 aa10.22□□□□□ -0.77
MRPS28-209ENST00000522987 DEFA3P59666 94 aa10.22□□□□□ -0.77
MRPS28-209ENST00000522987 C14orf178Q8N769 122 aaPredicted RBP10.22□□□□□ -0.77
MRPS28-209ENST00000522987 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
MRPS28-209ENST00000522987 EPDR1Q9UM22 224 aa10.22□□□□□ -0.77
MRPS28-209ENST00000522987 DNAH8Q96JB1 4490 aa10.22□□□□□ -0.77
MRPS28-209ENST00000522987 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 UBE2G2P60604 165 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 CYB561D1Q8N8Q1 229 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 TM2D2Q9BX73 214 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 ALG5Q9Y673 324 aa10.21□□□□□ -0.77
MRPS28-209ENST00000522987 H3BVH4 76 aa10.2□□□□□ -0.78
MRPS28-209ENST00000522987 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
MRPS28-209ENST00000522987 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 M0R036 132 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 CIDEAO60543 219 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 CXorf1O96002 111 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 ASIPP42127 132 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 LAGE3Q14657 143 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 OR2G3Q8NGZ4 309 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 SUN5Q8TC36 379 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
MRPS28-209ENST00000522987 IFNA7P01567 189 aa10.18□□□□□ -0.78
MRPS28-209ENST00000522987 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
MRPS28-209ENST00000522987 Q5BKY6 102 aa10.18□□□□□ -0.78
MRPS28-209ENST00000522987 FAM74A4Q5TZK3 123 aa10.18□□□□□ -0.78
MRPS28-209ENST00000522987 PSMG3Q9BT73 122 aaPredicted RBP10.18□□□□□ -0.78
MRPS28-209ENST00000522987 ACTR3CQ9C0K3 210 aaPredicted RBP10.18□□□□□ -0.78
MRPS28-209ENST00000522987 TMEM167BQ9NRX6 74 aa10.18□□□□□ -0.78
MRPS28-209ENST00000522987 A0A087WWL8 130 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 A6NHS1 94 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 A8MWV9 139 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 B4DEV8 164 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 FGF8P55075 233 aaPredicted RBP10.17□□□□□ -0.78
MRPS28-209ENST00000522987 SAPCD1Q5SSQ6 148 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 PTH2Q96A98 100 aa10.17□□□□□ -0.78
MRPS28-209ENST00000522987 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 TMSB15BA0A087X1C1 80 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 TRAV8-3A0A0A6YYJ7 113 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
MRPS28-209ENST00000522987 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
MRPS28-209ENST00000522987 Q86TA4 180 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 AQP10Q96PS8 301 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 KLK12Q9UKR0 248 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
MRPS28-209ENST00000522987 RBFOX3A6NFN3 312 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 PEX7O00628 323 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 MBP02144 154 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 ARMS2P0C7Q2 107 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 Q6ZSA8 131 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
MRPS28-209ENST00000522987 CRIP1P50238 77 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 SERF2P84101 59 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 MED28Q9H204 178 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 URGCP-MRPS24S4R325 110 aa10.14□□□□□ -0.79
MRPS28-209ENST00000522987 A0A1W2PRE2 83 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 M0R381 172 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 SH2D1AO60880 128 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 C1QBP02746 253 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 NIT1Q86X76 327 aa10.13□□□□□ -0.79
MRPS28-209ENST00000522987 OR11H4Q8NGC9 324 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms