RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 TRBV6-4A0A1B0GX49 114 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 HMSDA8MTL9 139 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 C17orf112F2Z3M2 114 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 LAGE3Q14657 143 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 RHOHQ15669 191 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 CMTM2Q8TAZ6 248 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 ATP5SQ99766 215 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 Q9UF83 564 aa10.06□□□□□ -0.8
TRAPPC9-213ENST00000522504 DAZ4Q86SG3 579 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 ATP6V0E2Q8NHE4 81 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 KCNS1Q96KK3 526 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 DAZ3Q9NR90 486 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-213ENST00000522504 PGPEP1LA6NFU8 196 aa10.04□□□□□ -0.8
TRAPPC9-213ENST00000522504 TAS2R45P59539 299 aa10.04□□□□□ -0.8
TRAPPC9-213ENST00000522504 BAALCQ8WXS3 180 aa10.04□□□□□ -0.8
TRAPPC9-213ENST00000522504 HMGB3O15347 200 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-213ENST00000522504 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
TRAPPC9-213ENST00000522504 ZNF345Q14585 488 aa10.03□□□□□ -0.8
TRAPPC9-213ENST00000522504 ZNF506Q5JVG8 444 aa10.03□□□□□ -0.8
TRAPPC9-213ENST00000522504 WFDC1Q9HC57 220 aa10.03□□□□□ -0.8
TRAPPC9-213ENST00000522504 RNASE3P12724 160 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-213ENST00000522504 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-213ENST00000522504 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
TRAPPC9-213ENST00000522504 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.81
TRAPPC9-213ENST00000522504 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
TRAPPC9-213ENST00000522504 A0A0D9SG52 128 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 CIDEAO60543 219 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 RAB2AP61019 212 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 GAGE1Q13065 139 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 GAGE4Q13068 117 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 GAGE5Q13069 117 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
TRAPPC9-213ENST00000522504 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 BCL2L11O43521 198 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 GCGP01275 180 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 IGLV2-11P01706 119 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
TRAPPC9-213ENST00000522504 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 TMUB2Q71RG4 321 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 C9orf62Q8N4C0 152 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 SCGB1C1Q8TD33 95 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 PTH2Q96A98 100 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
TRAPPC9-213ENST00000522504 TAAR5O14804 337 aa9.99□□□□□ -0.81
TRAPPC9-213ENST00000522504 CIRBP-AS1Q8TBR5 109 aa9.99□□□□□ -0.81
TRAPPC9-213ENST00000522504 SAMD10Q9BYL1 202 aa9.99□□□□□ -0.81
TRAPPC9-213ENST00000522504 PARLQ9H300 379 aa9.99□□□□□ -0.81
TRAPPC9-213ENST00000522504 JPT2Q9H910 190 aa9.99□□□□□ -0.81
TRAPPC9-213ENST00000522504 BORCS7-ASMTA0A0B4J1R7 106 aa9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 RBFOX3A6NFN3 312 aa9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 TCRAP04437 139 aa9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 UFSP1Q6NVU6 142 aa9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 PSG8Q9UQ74 426 aa9.98□□□□□ -0.81
TRAPPC9-213ENST00000522504 A0A1W2PPV4 95 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 ACOT6Q3I5F7 207 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 HSD17B11Q8NBQ5 300 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 NDFIP1Q9BT67 221 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 ZNF471Q9BX82 626 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
TRAPPC9-213ENST00000522504 IGKV3D-20A0A0C4DH25 116 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 GGTLC3B5MD39 225 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 OXTP01178 125 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 SYT8Q8NBV8 401 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 OR10G9Q8NGN4 311 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 OR10G7Q8NGN6 311 aa9.96□□□□□ -0.82
TRAPPC9-213ENST00000522504 SMUG1Q53HV7 270 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 PRNTQ86SH4 94 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 NIT1Q86X76 327 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
TRAPPC9-213ENST00000522504 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 SERTM2A0A1B0GWG4 89 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 ATP6V0CP27449 155 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 FLI1Q01543 452 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 Q8N976 141 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
TRAPPC9-213ENST00000522504 A0A087WWC5 75 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms