RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 DEFB131AP59861 70 aa13.73□□□□□ -0.21
TRAPPC9-210ENST00000521667 M0R381 172 aa13.72□□□□□ -0.21
TRAPPC9-210ENST00000521667 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
TRAPPC9-210ENST00000521667 NSD1Q96L73 2696 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-210ENST00000521667 TRAV12-2A0A075B6T6 113 aa13.71□□□□□ -0.21
TRAPPC9-210ENST00000521667 GAS8-AS1O95177 125 aa13.71□□□□□ -0.21
TRAPPC9-210ENST00000521667 SPINK13Q1W4C9 94 aa13.71□□□□□ -0.21
TRAPPC9-210ENST00000521667 MAP1LC3AQ9H492 121 aa13.71□□□□□ -0.21
TRAPPC9-210ENST00000521667 KNCNA6PVL3 124 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 SPRY2O43597 315 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 TNFRSF6BO95407 300 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 DDTP30046 118 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 DEFA6Q01524 100 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 TDRG1Q3Y452 100 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 TMEM70Q9BUB7 260 aa13.71□□□□□ -0.22
TRAPPC9-210ENST00000521667 KIR2DL5BA0A0G2JN68 375 aa13.7□□□□□ -0.22
TRAPPC9-210ENST00000521667 KIR2DL5BA0A0G2JPC4 375 aa13.7□□□□□ -0.22
TRAPPC9-210ENST00000521667 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
TRAPPC9-210ENST00000521667 KIR2DL5AQ8N109 375 aa13.7□□□□□ -0.22
TRAPPC9-210ENST00000521667 VAMP8Q9BV40 100 aa13.7□□□□□ -0.22
TRAPPC9-210ENST00000521667 CYSRT1A8MQ03 144 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 HLA-DRB4P13762 266 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 SPAG8Q99932 426 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 HSPB8Q9UJY1 196 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 HLA-DRB4X5D2U9 266 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 OR4C46A6NHA9 309 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 CD7P09564 240 aa13.69□□□□□ -0.22
TRAPPC9-210ENST00000521667 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 A8MTW9 85 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 NXPH4O95158 308 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 FOSL1P15407 271 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 OR2K2Q8NGT1 345 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 MAP6D1Q9H9H5 199 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 H3BMM0 161 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 CRXO43186 299 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 PROK1P58294 105 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 MRAP2Q96G30 205 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 DPH3P1Q9H4G8 78 aa13.68□□□□□ -0.22
TRAPPC9-210ENST00000521667 SYS1-DBNDD2H3BUS1 97 aa13.67□□□□□ -0.22
TRAPPC9-210ENST00000521667 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
TRAPPC9-210ENST00000521667 IGHV1OR15-1A0A075B7D0 117 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 A0A096LNJ9 63 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 AP1S3Q96PC3 154 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 MAP1LC3CQ9BXW4 147 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 ZNF256Q9Y2P7 627 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 FN1P02751 2386 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 ZNF124Q15973 351 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 C14orf178Q8N769 122 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 NRACQ8N912 160 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
TRAPPC9-210ENST00000521667 IGHV3-16A0A0C4DH30 117 aa13.65□□□□□ -0.22
TRAPPC9-210ENST00000521667 LINC01546A6NGU7 62 aa13.65□□□□□ -0.22
TRAPPC9-210ENST00000521667 FXYD7P58549 80 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 Q8N1Y9 231 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 ZNF747Q9BV97 191 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1BA6NDE4 496 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1EA6NEQ0 496 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 HBDP02042 147 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1DP0C7P1 496 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 C9orf85Q96MD7 179 aa13.64□□□□□ -0.23
TRAPPC9-210ENST00000521667 C20orf202A1L168 122 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 PET117Q6UWS5 81 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 Q8N8P6 123 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 MDFICQ9P1T7 246 aa13.63□□□□□ -0.23
TRAPPC9-210ENST00000521667 SETD2Q9BYW2 2564 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-210ENST00000521667 IGLV2-18A0A075B6J9 118 aa13.62□□□□□ -0.23
TRAPPC9-210ENST00000521667 NDUFAF3Q9BU61 184 aa13.62□□□□□ -0.23
TRAPPC9-210ENST00000521667 MGPP08493 103 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 SPATA45Q537H7 98 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 TRGV11A0A075B6L2 103 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 POM121L12Q8N7R1 296 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
TRAPPC9-210ENST00000521667 F8P00451 2351 aa13.6□□□□□ -0.23
TRAPPC9-210ENST00000521667 SMIM17P0DL12 118 aa13.6□□□□□ -0.23
TRAPPC9-210ENST00000521667 TRAV9-2A0A087WT02 112 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 CRLF1O75462 422 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 ZNF705AQ6ZN79 300 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 SYT8Q8NBV8 401 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 RASL10AQ92737 203 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 CBY3A6NI87 242 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 H0Y8G0 127 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 SAP30O75446 220 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 FCER1GP30273 86 aa13.59□□□□□ -0.23
TRAPPC9-210ENST00000521667 AGRNO00468 2067 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms